Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1693 ATGACGACGAGGTTCAAGAAGAACAGAAAGAAGAGAGGGCATGTGAGCGCTGGCCATGGTCGTATCGGAAAGCACAGGAAGCATCCGGGTGGTCGAGGTAACGCCGGAGGTATGCACCACCACCGAATCCTCTTCGATAAATACCATCCCGGTTATTTCGGTAAGGTCGGTATGCGATACTTCCACAAGCTTCGCAACCAATTCTATTGCCCCATTGTCAACGTCGACAAACTGTGGTCCTTAATTCCCCAAGATGCGAAGGATAAGGCTTCTAAGGACAATGCTCCCTTGATCGATGTCACTCAGTTTGGATACTTCAAGGTGTTGGGCAAAGGGGTTTTGCCTGAGAATACGCCCGTCGTCGTGAAGGCCAAGCTCGTGTCCAAGATTGCTGAGAAGAAGATCAAGGAAGCGGGAGGTTCTGTTGTCCTCACTGCTTAG 441 0.5057 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNQFYCPIVNVDKLWSLIPQDAKDKASKDNAPLIDVTQFGYFKVLGKGVLPENTPVVVKAKLVSKIAEKKIKEAGGSVVLTA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1693 146 SUPERFAMILY Ribosomal proteins L15p and L18e 6 145 IPR036227 -
Lele24g1693 146 Hamap 50S ribosomal protein L15 [rplO]. 1 145 IPR030878 GO:0003735|GO:0006412|GO:0015934
Lele24g1693 146 MobiDBLite consensus disorder prediction 1 35 - -
Lele24g1693 146 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 IPR021131 -
Lele24g1693 146 ProSitePatterns Ribosomal protein L15 signature. 107 139 IPR001196 GO:0003735|GO:0005840|GO:0006412
Lele24g1693 146 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 146 - -
Lele24g1693 146 FunFam 60S ribosomal protein L27a 58 146 - -
Lele24g1693 146 Gene3D - 58 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1693 Lele-ChrLele24 22284997 22285437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1693 1 146 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 87.671 1.25e-94 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1693 24 22284997 22285437 Lele17g1079 17 21274428 21276068 CCT
Lele24g1693 24 22284997 22285437 Lele18g0462 18 2678778 2679444 CCT
Lele24g1693 24 22284997 22285437 Lele19g0482 19 2717713 2719348 CCT
Lele24g1693 24 22284997 22285437 Lele20g0974 20 15814252 15814916 CCT
Lele23g0255 23 1777958 1778287 Lele24g1693 24 22284997 22285437 ECH
Lele24g1693 24 22284997 22285437 Lele24g1693 24 22284997 22285437 ECH
Lele21g1752 21 25275530 25276832 Lele24g1693 24 22284997 22285437 hybridization
Lele22g1727 22 22624742 22625182 Lele24g1693 24 22284997 22285437 hybridization