Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1692 ATGCTTGAATTTAGCAGACATACTTCTACTTTACATGGAGTAAAGATGCTAGACATGTTTGTTAAAAAACTGCCAATTCGGAATGAGAAAACTCATTATGCTTCAGCTCTCACCCTTGTTTTCCGATGTCACAACGAGAGGAACACAGATATGGAACATGAAGATCCTAAACCAGCAGAAGCCAAGGATTACTACACCGCACAACGATGGTGGTCTGAAAATAATGAACAAGCTGTTAATGGCGTCATCCCTCGTGCTGCTACTAACCAAAACTCAGACTTCTGTAACTTGAAGGAAATATTTACGCCCCAAGTTCCCAGGGAAGGCGACAAAGTAGTACTGAAGGACCTGATTGATCTGCAGGTTGGTGACGAAGACGACGACGCTGTTGAGGAGAAGCATCATTACTATGGGCGAGCTGTGTCATCAGAAATAGAGGAGATATTTGAAGAAGATGGAAAGATCAACAAAACAGATAACAGAGAAATTAATAGAGCTGAAGAAGAAGACATTTACGTGGCTGTTGGGAAAGATGACATGGACGTCGTAAAATGGGCTCTGGATCATGCAGTTTCTCCTACTTCTCGGATTTTCTTCATCCATGTTTCTGCTCCTATCACTTTGATTCCCACGCCAGGTCTCTTCAGTTCACTCACATTTCCATTAACTTTGATGCCTGCTTTTGTTTTGCAAGAGAATCACTTATCTATATGTTCTGATGTGGCAATAATATGGATGAACACCGAATTCTCTGCATTTTGGTTGAGTGATTGGCTGATATATTTGATGGTATGTGTGACAGTGGGAAACTTACCAAGACGCCAATTAAATCAGCAACGGGTGAAAAGTTATGAGAATGAAGAGATGAACAAGACGAACAGCATTCTGCAGAAGTACATCCAGTTGAGTAACGATGCTCAGGTGAGGGCAGAAACGGTGCATCTGGAGAGCAATGACACAGCCAAAGCAATTCTGGAACTTATTTCTGTTCTTAACATCAAAAGCCTCGTTATGGGAATAAAAAAGCCTCCTCACTCATGGGGGGAGAACAAATTGAGCAGGGGGGAAATAGTGAAGCAGAATGCTCCTGAGTTCTGTGACGTTGCTTTGGTTTGTCATGGGAATCAAATTCTGAAGAAGACGAATTATGACATTGTTTCGCAACACAGACACCATTCCTCAGCCAGATTCCTGCCCTGTATGTGCTTCTCAGTCGTAATTGCTAGCTCCAAGGATCTGAACATGAACCCTTACGACAACAGATATACAGACTCGGCTTCTTATCGCAACCGCAGGAGTGATTTAATTGGATCTGTGCCGCCGATGGTCCCTCCAATGATTGGGGATGCCAGCTCGAGCTACGGCCGGGGAGGTACTGGTCCTTATGGTCCTGCACCGGTTGGTTATAATATGGGTGGAAGAGGTGCCGGGAGTGCTTTCGGAGCGGCACCTGTTGCCTCAAATTATAATGAGTTGCCGGCGTTCATGCCGCCTCCTGGAGGCTTTGACATAGGTCGCGATGGTGGCACTAGCCAAAGGGGCTTCGGCGGTAGACTCGGAAACGGTCGTGCTGGTGATAGAAAAGATGACTTAGGTCGTCGCGGAAGTGGAAGAGACCGGGACAGCAGTTTCACTGGAGGTCGGAGAGGTGGTAGATTTGGTGGAACTCACGGAGACAGGACCTCGGGGAGAGGTGGTGTGGCTGGAGGTAGAGGTTTCGGTGGAAGCACTGGATTTGGGAGTGCCCATGGCCGTGGCCGGGGCCGTGGCCGGGGTGATGGTGGTAGTGGTAGAGGAGGAAGACATGGTGGTTCTTCCAAGGCTGACTTGGACAACATAGCACTTCCCAAGCAAGATTTTAGAAATTTGGTTCCCTTTGAGAAGAATTTTTACATTGAAAGCCCATCGGTGCGGGCAATGTCTGATCATGAGCTTATGGTTTACCGTGCCAGTAGGGAGATCACAGTGCAAGGGCATGACATTCCTAAACCAATTCGAACGTTCCAAGATGCAAATTTTCCTGGTTACTGCCTTGAGGTGATTGCCAAATTGGGTTTTGTGGAGCCTACACCAATTCAGGCTCAAGGTTGGCCCATGGCTCTGAAGGGTAGAGATTTGATTGGCATTGCTGAGACCGGCTCAGGAAAAACACTCGCATATCTGCTTCCCGCTTTAGTGCATATCAGTGCACAATCTCGATTGGTACAAGGTGAAGGCCCCATTGTTTTAGTTCTGGCACCAACTAGAGAGTTAGCTGTTCAAATTCAGGAAGAAGCTGTAAAATTTGGTTCTCGAGCAAATATTAGAAGTACTTGTATCTATGGTGGTGCCCCAAAGGGACCTCAAATTCGTGATCTTAAAAGAGGTGTTGAAATTGTTATTGCCACACCTGGTCGCCTAATAGATATGTTGGAAGCTCAGCATACAAATCTGCGAAGGGTGACTTACCTTGTGTTGGATGAAGCTGATCGAATGCTGGACATGGGCTTTGAACCTCAGATAAGAAAAATTATTGGGCAGATCCGGCCTGATAGACAGACATTGTACTGGAGTGCAACATGGCCAAGAGAAGTTGAAACTCTGGCAAGGCAGTTTCTACGCAATCCATATAAGGTCATTATTGGATCACCAGATTTGAAAGCAAATCAATCTATAAATCAAGTTGTTGAAGTTTTAACAGAAGTGGAGAAATACAATAGATTGATCACACTGCTTAAAGAGGTGATGGATGGGAGTCGAATTCTAATATTTATTGAGACAAAAAAGGGTTGTGATCAAGTTACAAGACAGTTGAGAATGGATGGCTGGCCTGCACTTTCTATCCATGGCGATAAAAACCAGGCTGAAAGGGACTGGGTCTTGGCTGAATTTAAGAGTGGCAGAAGTTCAATAATGACGGCCACTGATGTTGCTGCACGGGGTCTTGTTCCATTAACATGGTTGAGATGCGGGCCCGTCATTTTTAGCATAGGCTACTGCAGTGTGGGGCTAAAACGTAGTGAAATTGATTGCAGCCCATCCACAGTTAGGGAGCTGGTTGTCTCTGCAGCCTGGTTGACTCATGCATGCTTAGTGGATAATTGGATATGGGAGGTGGAAATGATGGTGAAGCTGCTCCTTATCCCTGCAACGTTAAGGTGGGCACATTTAGGTGATGAATGTGTTGACTTTGAGTTTGATCTCCATAATCTTAGGGATGTGAAGGACATAAAATGTGTGATCAATTATGATTTTCCCTCGAGCCTGGAAGATTATGTCCACAGAATTGGTCGAACAGGTCGTGCAGGGGCTAAAGGAACTGCCTTCACCTTTTTCACGCATGCAAATGTCAAGTTTGCCAGGGATTTGATCAAGATCTTGCAAGATGCTGGCCAGGTTGTGAGTCCTGCTCTATCTGCCTTGTCTCGGTCAGCTGGTTCTGGTCAATTTGGATCTGGGGGAAACTTCCGCTCCAGGGGACGGGGAGGTTATGGGAATCGAGGTCACATATCAGGATCCAATACCATTCCTCTCGGTTCAAGGAAGCCTTGGTAG 3534 0.4593 MLEFSRHTSTLHGVKMLDMFVKKLPIRNEKTHYASALTLVFRCHNERNTDMEHEDPKPAEAKDYYTAQRWWSENNEQAVNGVIPRAATNQNSDFCNLKEIFTPQVPREGDKVVLKDLIDLQVGDEDDDAVEEKHHYYGRAVSSEIEEIFEEDGKINKTDNREINRAEEEDIYVAVGKDDMDVVKWALDHAVSPTSRIFFIHVSAPITLIPTPGLFSSLTFPLTLMPAFVLQENHLSICSDVAIIWMNTEFSAFWLSDWLIYLMVCVTVGNLPRRQLNQQRVKSYENEEMNKTNSILQKYIQLSNDAQVRAETVHLESNDTAKAILELISVLNIKSLVMGIKKPPHSWGENKLSRGEIVKQNAPEFCDVALVCHGNQILKKTNYDIVSQHRHHSSARFLPCMCFSVVIASSKDLNMNPYDNRYTDSASYRNRRSDLIGSVPPMVPPMIGDASSSYGRGGTGPYGPAPVGYNMGGRGAGSAFGAAPVASNYNELPAFMPPPGGFDIGRDGGTSQRGFGGRLGNGRAGDRKDDLGRRGSGRDRDSSFTGGRRGGRFGGTHGDRTSGRGGVAGGRGFGGSTGFGSAHGRGRGRGRGDGGSGRGGRHGGSSKADLDNIALPKQDFRNLVPFEKNFYIESPSVRAMSDHELMVYRASREITVQGHDIPKPIRTFQDANFPGYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHISAQSRLVQGEGPIVLVLAPTRELAVQIQEEAVKFGSRANIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSPDLKANQSINQVVEVLTEVEKYNRLITLLKEVMDGSRILIFIETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSSIMTATDVAARGLVPLTWLRCGPVIFSIGYCSVGLKRSEIDCSPSTVRELVVSAAWLTHACLVDNWIWEVEMMVKLLLIPATLRWAHLGDECVDFEFDLHNLRDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHANVKFARDLIKILQDAGQVVSPALSALSRSAGSGQFGSGGNFRSRGRGGYGNRGHISGSNTIPLGSRKPW 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1692 1177 Pfam Helicase conserved C-terminal domain 896 1096 IPR001650 -
Lele24g1692 1177 FunFam probable ATP-dependent RNA helicase DDX17 628 875 - -
Lele24g1692 1177 Gene3D - 629 875 IPR027417 -
Lele24g1692 1177 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 697 872 IPR014001 -
Lele24g1692 1177 CDD DEADc_DDX5_DDX17 678 872 - -
Lele24g1692 1177 SMART helicmild6 925 1096 IPR001650 -
Lele24g1692 1177 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 900 1135 IPR001650 -
Lele24g1692 1177 MobiDBLite consensus disorder prediction 522 546 - -
Lele24g1692 1177 MobiDBLite consensus disorder prediction 499 612 - -
Lele24g1692 1177 CDD SF2_C_DEAD 885 1105 - -
Lele24g1692 1177 Pfam DEAD/DEAH box helicase 690 861 IPR011545 GO:0003676|GO:0005524
Lele24g1692 1177 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 645 1133 - -
Lele24g1692 1177 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 666 694 IPR014014 GO:0003724
Lele24g1692 1177 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 818 826 IPR000629 -
Lele24g1692 1177 MobiDBLite consensus disorder prediction 1136 1177 - -
Lele24g1692 1177 Gene3D - 876 1137 IPR027417 -
Lele24g1692 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1112 IPR027417 -
Lele24g1692 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 649 874 IPR027417 -
Lele24g1692 1177 SMART ultradead3 685 888 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1692 Lele-ChrLele24 22262462 22279623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1692 663 975 Eukaryotic Initiation Factors Gene Family AT3G19760 34.505 1.69e-51 185