Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1689 ATGGACTCCAAACACACTCCTACACTGAAATTCCTCTGTAGCTACGGCGGCAAGATTCGTCTCCGTTCCACCGACGGCGAACTCCGTTACATCGGCGGCCACACCAGAGTCCTCTCTGTTGATCCTTCCATTTCCTTTTCAGACCTTATGGTAAAGATTGTAGAGTTCTGTGGTTCGTCTGTGACTTTGAAGTGTTCATTGCCCAACGGAGACCTCGAGACGTTGATTTCCATTACTAACGATGAGGATTTGGCCATTACCATCGAAGAATATAACCGAGCTTCGTCGTCTACGGCTGACCCGTTGAAGATCAGAGCCATTCTTTCGTCGCCCAGCTCTCTCAAGAAAGTATTTCCTCCTCCGTCTTCGCGATCGTCGAGCGCCAACATCTCTTCGACTGGATCATCGACTCTCTCCTCCGCCGAATCATTGCCGCGTTCCCCTGCAAATTGCGTTCTCCGTCCGGTCGCGTATCCGGGAGGAGTCCGTTACGGTTCGGGAAAACCGTGCTGCTCTTCGGGTCAATTCTACAGAAGCTCTCGATTCTTGAACCGTGAACCTAGCTGCCCCAATTCCTGCAATCTCTGCCACTGA 594 0.5168 MDSKHTPTLKFLCSYGGKIRLRSTDGELRYIGGHTRVLSVDPSISFSDLMVKIVEFCGSSVTLKCSLPNGDLETLISITNDEDLAITIEEYNRASSSTADPLKIRAILSSPSSLKKVFPPPSSRSSSANISSTGSSTLSSAESLPRSPANCVLRPVAYPGGVRYGSGKPCCSSGQFYRSSRFLNREPSCPNSCNLCH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1689 197 CDD PB1_UP2 12 108 - -
Lele24g1689 197 Gene3D - 29 108 - -
Lele24g1689 197 MobiDBLite consensus disorder prediction 115 146 - -
Lele24g1689 197 SMART PB1_new 23 111 IPR000270 GO:0005515
Lele24g1689 197 SUPERFAMILY CAD & PB1 domains 25 113 - -
Lele24g1689 197 MobiDBLite consensus disorder prediction 113 146 - -
Lele24g1689 197 Pfam PB1 domain 26 96 IPR000270 GO:0005515
Lele24g1689 197 PANTHER OS05G0427100 PROTEIN-RELATED 7 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1689 Lele-ChrLele24 22249850 22250557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1689 1 113 MAP Kinase Kinase Kinase AT3G46920 38.596 2.29e-22 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1689 24 22249850 22250557 Lele24g1689 24 22249850 22250557 ECH
Lele21g1748 21 25261383 25262093 Lele24g1689 24 22249850 22250557 hybridization
Lele22g1723 22 22601069 22601772 Lele24g1689 24 22249850 22250557 hybridization