Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1679 ATGAATAGGGAAAGAACAAAGCCTTTAATAGGCCCACCAAGGTTATGGGCCAGGAGGCACATTTGGTTGTCCAGCTGGGGTATTCAGAATTTGATTCCCGCAATGCCGCAGGATTCGTCTGAACAAGATGATCCTGATTCTGAGTTCGTGGAGGTTGATCCCACTGGTCGATATGGTCGGTACAAGGAGATTTTGGGGCAGGGGGCTTTCAAAAAGGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCCTGGAATCAGGTTAAGGTGGCAGATCTATTGCGCAACGATGAAGATTTGGAGCGCCTATATTCAGAAGTGCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTTGATACAAAGAATGAGAACATCAACTTCATCACTGAGATTTTCACTTCTGGAACTTTACGCCAATATCGGCAGAAACATAAGCATGTTGACTTAAGAGCATTGAAGAAATGGTCTAGACAAATTTTGGATGGCCTTTCTTATCTTCACAGTCATGATCCGCCAGTTATCCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGCGAGGTTAAAATTGGTGACTTGGGATTGGCTGCCATACTTCAGCAAGCCAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCTCCCGAGCTTTATGAAGAGGAATACAATGAACTTGTTGATATCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGACTGTCGAGTATCCATACGTTGAATGTGCTAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTAGTAAAAGTGAAAGACCCTGGAGTTAAAGTGTTTATAGAAAAGTGTATTGCAAATGTTTCTGAGAGGTTGCCTGCAGGGGAACTCTTAATGGATCCCTTTCTTCTTCCAGATGATGAAAGTGACAGTATAGGTGGTTCTTTAAGGTCTAGAGCCCCTGATTTTGGACATAGTGACCATCATGTTATTCATAATCATCCTGAAGAAACTTCTGCCGAAACTGGTTGGGCATTCAGAGTAGAAGGTCAAAGGAGAGATGTCAATACTATATTTCTGAAACTGAGAATAGTAGACTCCACAGGTCACATGCGCAATATCCACTTCCCTTTTGATGTTGAAGCAGACACTGCAATTGCTGTCGCTAGTGAAATGGTTGAGGAGTTGGAACTCACAGATCAAGATGCTACAACTATTGCTGAAATGATTGACTTGGAAATTCGGTATCTCATTCCAGATTGGAATCCTAATGGAACTCCTACTGCTTATAGCATTGATCAAGAATTAACAGCTTTAGGTGGCCGTACCTCCGAAACTAGGGATGAGGCTTCTCCACAAGGAAATAATTCTCCAGCTTCTGCTGGCAGTCTTTCGCTAGAACGATTACCTTCAGGTCGTAACTATTGGTCTGACTCACCCAAGACAGGTAGAAACTCTCCATTAAGGCCTGGTGCTTCAAAATTGTCTAGTCAAGTGGATTTGAATACTGCAGGAACATCAACCGTGTATGGTGCTACTTCAGTTGAGCAACAGGATGGTAACTATAGTTGTGATGGTGATAATAGTGTAGAGAAGAAATCTACTGGGACTGTTAATTCTCATTCCAGGGATAGAAGTATTACATTTGGGGATGTACAGGCAACCACTGGAGAGTCTCCTTTGGTAGAAAGACCTTTAGAATTGAAAGATGATGAATTAGAAGGTGTCAATATAATTGCTGCAAAACTCAAGCAATTATTGGCGAAACATCAAGAGGAGGAAGATGAACTAAAGAAAAAGCATGAATTGGCTGTGTCAAATTTTCTGAAGGAACTTCCTCAAAAAATTCAACATAAGGTCTTAAATATATGCAACTTGGAGGCATCTGATAGTGGAAATGTATAG 1947 0.4078 MNRERTKPLIGPPRLWARRHIWLSSWGIQNLIPAMPQDSSEQDDPDSEFVEVDPTGRYGRYKEILGQGAFKKVYRAFDELEGIEVAWNQVKVADLLRNDEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILDGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLVKVKDPGVKVFIEKCIANVSERLPAGELLMDPFLLPDDESDSIGGSLRSRAPDFGHSDHHVIHNHPEETSAETGWAFRVEGQRRDVNTIFLKLRIVDSTGHMRNIHFPFDVEADTAIAVASEMVEELELTDQDATTIAEMIDLEIRYLIPDWNPNGTPTAYSIDQELTALGGRTSETRDEASPQGNNSPASAGSLSLERLPSGRNYWSDSPKTGRNSPLRPGASKLSSQVDLNTAGTSTVYGATSVEQQDGNYSCDGDNSVEKKSTGTVNSHSRDRSITFGDVQATTGESPLVERPLELKDDELEGVNIIAAKLKQLLAKHQEEEDELKKKHELAVSNFLKELPQKIQHKVLNICNLEASDSGNV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1679 648 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1679 648 Gene3D Phosphorylase Kinase; domain 1 43 140 - -
Lele24g1679 648 MobiDBLite consensus disorder prediction 456 478 - -
Lele24g1679 648 FunFam probable serine/threonine-protein kinase WNK9 142 322 - -
Lele24g1679 648 MobiDBLite consensus disorder prediction 456 513 - -
Lele24g1679 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lele24g1679 648 Gene3D - 370 436 - -
Lele24g1679 648 Pfam Protein kinase domain 62 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1679 648 CDD STKc_WNK 57 317 - -
Lele24g1679 648 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 40 631 - -
Lele24g1679 648 Gene3D Transferase(Phosphotransferase) domain 1 142 322 - -
Lele24g1679 648 SUPERFAMILY Protein kinase-like (PK-like) 61 358 IPR011009 -
Lele24g1679 648 FunFam Probable serine/threonine-protein kinase WNK1 44 140 - -
Lele24g1679 648 MobiDBLite consensus disorder prediction 484 513 - -
Lele24g1679 648 Coils Coil 587 621 - -
Lele24g1679 648 MobiDBLite consensus disorder prediction 526 557 - -
Lele24g1679 648 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 425 IPR024678 GO:0004674|GO:0005524
Lele24g1679 648 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1679 Lele-ChrLele24 22198353 22203295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1679 35 438 MAP Kinase Kinase Kinase AT3G51630 55.663 1.16e-160 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele24g1679 Pkinase 6.7e-50 CL0016