Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1673 ATGGATTCCAAGTTCACTTTTGTTGGAGTTGAGGTAGAGAGCGACATAACAAAGCTTAGTGATGAGTATGGTCTCAGATTCACTCATTTCGAAGATATTAGGGAACTTGCAAAAGGTTACATGCATGCGGTGGACTATTGCGAAGCCTGCTTGATTTGGTCTGCGTTATTGTTGCTGGTGTTACTGTTTATTGCTTCACAGTTCAAACCGAAAAGCAAAGTGTCAGCGTCTCATTCTTCAACCATTTCTTACAATCCTGCCACATCAAAATACAGTGTCAAGTATGGAGGGAAGTCCATAGAAACCGCAGTCACCGATAAGGCCGCCGTAGCAGATGAATGGGTTGAAGAGATCATAAAGAAATATAGTTTGCAAGCGAAAGTGGTTGTTGGATTCGAGGTAGAGTGGAAGCCAGTCGGAATTTTCATGGAACCTGCAACATTACAACTCTGCATCGGTGATAAGTGCCTCATTCTTCAACTCTTTTACATAGACCAGTTTCCCACCACTTCGCTCAAGAGCTTCTTCCTGAATTGGGATTTCACATGGGTATCTCATACCGATTTCCTACCAAATCTTCTCTTCTTTCTACCCTTGTTTCGATTCGAGATCATGGAGATGGAGCGTGTCTTCGAATTTCCTCATACTCACCTCGATCGTCGGCCGAGGAAGAGGCCGCGTTTAGGTTGGGACATCCCTGAGGCCCCGAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGAAATCTTTCAAGCTATGCACCATCAAGGGGCCCCTCTGAGCATACAAATAATTCTCTAAATGTTAAGGGAGTTGCTCGAATTGTTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACACAGCAAAATGGGGGAAGGAACTTTTGGGCAAGTCTTGGAATGTTGGGACCGAGAACGGAAGGAGATGGTTGCAGTAAAAATTGTCCGTGGGATAAAAAAGTATAGAGAAGCTGCCATGATAGAGATTGAGGTCCTGCAACAGCTTGCTAAACATGATAAAGGTGGCAGTCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGCGAGATTGGCAGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGCGCATGATCCATACTGACTTGAAGCCAGAAAACATACTACTAGTTTCGCCAGAATATGTCAAAGTTCCTGACTACAGGGGCTCATCCAGATCACCAAGTTCTTATTTCAAGAGAGTGCCAAAGTCAAGTGCTATCAAAGTTATTGATTTTGGCAGCACGACTTATGAGCGAGATGATCAGACTTACATTGTATCAACACGACATTATAGGGCACCCGAAGTTATACTTGGTCTTGGATGGAGTTATCCATGTGATATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGCGAAGCTTTGTTTCAGACTCACGAGAACTTGGAGCACCTTGCAATGATGGAAAGGGTGCTTGGTCCGTTGCCTCAGCACATGTTGAAGAGAGTGGACCGACATGCAGAGAAGTATGTTCGAAGGGGTAGACTAGATTGGCCGGAGGGGGCCAATTCTAGGGATAGTATTAAAGCTGTAATGAAGCTGCCTAGGCTTCAGAATCTGGTAATGCAGCATGTGGACCACTCAGCTGGAGATCTGATACACGTGTTGCAGGGGCTACTTAGATATGACCCTTCTGAAAGACTAACCGCGAGGGAGGCTCTAAGACATCCCTTCTTTACAAGAGATCACCTTAGGAGATAG 1905 0.442 MDSKFTFVGVEVESDITKLSDEYGLRFTHFEDIRELAKGYMHAVDYCEACLIWSALLLLVLLFIASQFKPKSKVSASHSSTISYNPATSKYSVKYGGKSIETAVTDKAAVADEWVEEIIKKYSLQAKVVVGFEVEWKPVGIFMEPATLQLCIGDKCLILQLFYIDQFPTTSLKSFFLNWDFTWVSHTDFLPNLLFFLPLFRFEIMEMERVFEFPHTHLDRRPRKRPRLGWDIPEAPKAQVGLFCGQDVGNLSSYAPSRGPSEHTNNSLNVKGVARIVSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPEYVKVPDYRGSSRSPSSYFKRVPKSSAIKVIDFGSTTYERDDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGANSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1673 634 Pfam Protein kinase domain 302 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1673 634 FunFam Serine/threonine-protein kinase AFC2 289 382 - -
Lele24g1673 634 ProSiteProfiles Protein kinase domain profile. 302 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1673 634 Gene3D - 89 186 IPR036397 GO:0003676
Lele24g1673 634 FunFam Serine/threonine-protein kinase AFC2 378 627 - -
Lele24g1673 634 CDD PKc_CLK 289 627 - -
Lele24g1673 634 SMART serkin_6 302 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1673 634 SUPERFAMILY Ribonuclease H-like 124 184 IPR012337 -
Lele24g1673 634 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 205 630 - -
Lele24g1673 634 SUPERFAMILY Protein kinase-like (PK-like) 289 631 IPR011009 -
Lele24g1673 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Lele24g1673 634 Gene3D Phosphorylase Kinase; domain 1 289 382 - -
Lele24g1673 634 Gene3D Transferase(Phosphotransferase) domain 1 356 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1673 Lele-ChrLele24 22152172 22158815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1673 307 627 Core Cell Cycle Gene Families AT1G76540 25.904 1.93e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele24g1673 Pkinase 1e-49 CL0016