Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1669 ATGCAGGGTCAATTTTATCAAGTAGTGTGGACATACACTTTTGTGCTGCTAACTTATGGTGGGACTTATTGCCCTCTCTCTAATGGTTACCAACATAATGCATGCCTGATATCCTTGGATGAACAACTCAACAAGCAATTCTGGTCTGGGAGTAACATTGACAAGAACAAAGGAATGGTGGAGAATTTGCAACGCTATGGAGTAATATCATCGAAAAAGGTAGCTGAGGTTATGGAGACTGTAGACAGAGCTTTGTTTGTTCCTGATGGAACTCCACCTTATGTTGACAGCCCAATGGCAATAGGCTACAATGCCACTATATCTGCACCTCATATGCACGCCATGTGCCTCCAGTTGCTGGAGCAGAATTTGCAGCCTGGGATGCATGCTCTGGATGTTGGATCTGGGACTGGGTATCTTACAGCATGCTTTGCTTTGATGGTTGGACCCCAAGGTCGTGCTGTTGGCGTGGAGCATATTCCTGAATTAGTCTCTTCTTCATTGGAGAATATTCAAAAAAGTGCTGCAGCTCCACTGTTAAAAGATGGTTCCCTCTCGGTTCATGCTGGTGGTATGATTTCTAGACTGGCTTCTTTTAAACTTGAACGCCACGAAAATTCAGAAATTTCTCTTTCTTCTGATCTAGTTAGCTGTAAAATTAGGCTTTAG 669 0.4335 MQGQFYQVVWTYTFVLLTYGGTYCPLSNGYQHNACLISLDEQLNKQFWSGSNIDKNKGMVENLQRYGVISSKKVAEVMETVDRALFVPDGTPPYVDSPMAIGYNATISAPHMHAMCLQLLEQNLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSSSLENIQKSAAAPLLKDGSLSVHAGGMISRLASFKLERHENSEISLSSDLVSCKIRL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1669 222 Gene3D Vaccinia Virus protein VP39 46 203 IPR029063 -
Lele24g1669 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 177 IPR029063 -
Lele24g1669 222 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 55 185 - -
Lele24g1669 222 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 44 191 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1669 Lele-ChrLele24 22134929 22136841 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1669 24 22134929 22136841 Lele17g1109 17 21400568 21403635 CCT
Lele24g1669 24 22134929 22136841 Lele18g0432 18 2545814 2547631 CCT
Lele24g1669 24 22134929 22136841 Lele19g0451 19 2596264 2599086 CCT
Lele24g1669 24 22134929 22136841 Lele20g1001 20 15954438 15957376 CCT
Lele24g1669 24 22134929 22136841 Lele24g1669 24 22134929 22136841 ECH
Lele21g1725 21 25109630 25112428 Lele24g1669 24 22134929 22136841 hybridization
Lele22g1700 22 22455403 22457833 Lele24g1669 24 22134929 22136841 hybridization