Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1663 ATGACTACTACCTTCTTCCTCTGCTTTCTCCTCATCCCAACCCTCATTTCTTCTTCCCCTTTCGACGATCCTGAATCCATCGTCCAAGAGGTAAACAGGAAAATCAATGCCTCTGTCGCTAGGCGGAATTTGGGCTACCTCTCGTGTGGAACTGGCAACCCTATCGACGATTGCTGGAGGTGCGATCCTAATTGGGAGAAGAACAGGCAGAAGCTAGCCGATTGTGCGATAGGGTTCGGGAAGAATGCCATTGGCGGTAAAAACGGCAGGATTTACGTGGTGACTGACGCCGGCGATGACGATCCGGTGAATCCCCGGCCGGGGACTCTCAGGAACATGCAAGTCACCATCGCTTTTAACCACTTTGGCGAAGGCCTCGTCCAAAGAATGCCAAGATGCAGACTTGGATATTTCCATGTGGTGAACAACGACTACACTCATTGGGAAATGTATGCAATTGGGGGAAGTGCAAACCCAACCATCAATAGCCAGGGCAACAGATTCGTGGCACCCAATAACAGATTCAGCAAAGAGGTGACAAAGCATGAGGATGCACCAGAAAATGAATGGAGGGGTTGGAATTGGAGATCAGAAGGGGACTTGTTGGTAAACGGTGCGTTTTTCAGGTCATCAGGTGCTGGAGCCTCTTCTAGCTATGCAAGGGCTTCTAGCTTGAGTGCCAGACCATCTTCTCTTGTGGGTTCTCTCACCTCTGGTGCTGGTACCCTTATCTGCAGAAAAGGTTCTCGCTGCTGA 756 0.504 MTTTFFLCFLLIPTLISSSPFDDPESIVQEVNRKINASVARRNLGYLSCGTGNPIDDCWRCDPNWEKNRQKLADCAIGFGKNAIGGKNGRIYVVTDAGDDDPVNPRPGTLRNMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPNNRFSKEVTKHEDAPENEWRGWNWRSEGDLLVNGAFFRSSGAGASSSYARASSLSARPSSLVGSLTSGAGTLICRKGSRC 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1663 251 SUPERFAMILY Pectin lyase-like 111 251 IPR011050 -
Lele24g1663 251 PRINTS Pollen allergen Amb family signature 99 124 IPR018082 -
Lele24g1663 251 PRINTS Pollen allergen Amb family signature 75 92 IPR018082 -
Lele24g1663 251 Gene3D - 113 244 IPR012334 -
Lele24g1663 251 Gene3D - 52 112 IPR012334 -
Lele24g1663 251 SUPERFAMILY Pectin lyase-like 53 112 IPR011050 -
Lele24g1663 251 SMART amb_all 17 174 IPR002022 -
Lele24g1663 251 PANTHER PECTATE LYASE 18-RELATED 111 249 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1663 Lele-ChrLele24 22115333 22116970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1663 111 251 Polysaccharide Lyase AT4G24780 85.106 2.12e-76 235