Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1659 ATGGCTTCAGGCGAGGGATTTCTTACAGATGAGCAGAGGGAAATGCTAAAAATTGCCAGCAACAATGTGGAAAGTTTATCTTCATCTCCCAAATCTCCCACATCCTTTGTTGCTGACCATCATATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTACGGGTGAAGAAAGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGCGAATCTCATATAGACAGGAAAGATCCTAATTATGATAGTGGTGAGGAACCCTATCAGCTAGTTGGATCTACTGTCAGTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTTTCCACAATTGAGGAATATTTCAGCACTGGTGATGTGGATTTAGCTGCCTCTGATCTCAGAGAACCTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTGATTAGTCCTGCTCAGATTAAGGATGGATTTTTTTTGCTGCTCGAATCTGCTGATGATCTTGCTGTGGACATACTGGATGCAGTTGATGTCCTTGCTTTGTTTCTGGCTCGGGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCAAGGGCAAGAAAGGCACTTCCTGAGTCATCCAAGGGGTTTCAGGTTATACAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCACGCAGAGCTTGTAGAGAGGCGATGGGGTGGTACCACTCACATCACTGTTGAAGAAGTGAAGAAGAAGATTTCTGATTTATTAAGAGAATATGTTGAAAGTGGTGACACGGTTGAAGCCTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTCTTTCATCATGAGGTTGTGAAGAGGGCTCTGGTTCTTGCCATGGAGACCCGTTCAGCAGAATCTTTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGACTCATTAGTTCCAGCCAAATGGTGAAAGGTTTTTCTCGCTTTGCAGAAGGCCTAGATGATCTTGCACTTGACATTCCATCAGCGAAAACTTTGTTTCCATCATTGGTACCCAGGGCAATATCTGAAGGATGGCTCGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGTTATCCCAGTTGAAGATGAAGAAGTGAGGAACTACAAAAAGGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTCATTCGTAGTCTTGAAGATCTTGGAGCACCCGAGTTTAACCCAATATTTTTGAAGAAGCTAATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTGATGCTTCTGGAAAGTGCAGAAGATACTGCACTGGATATTTTAGATGCTTCGAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATCGATGATGTATTAGCCCCTCTGAATTTAGAAGAAATTGGCAGCAGGTTGCCACCTAAATGTAGCAGTAGTGAAACTGTGCGAATGGCTCGATCACTCGTTGCAGCTCGTCATGCTGGTGAGAGGCTGTTGAGATGTTGGGGTGGAGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTGTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGATCTCGGAATGCCTTTCTTTAACCATGAGGTGGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTGATCACTATCAATCAGATGACAAAAGGCTTCACCCGCATCAAGGACGGGCTCGATGATCTGGCTCTGGACATTCCAAATGCACGCGAGAAATTTGCCTTCTATGTGGAGCATGCAAACAACAATGGTTGGCTTTTACCTTCATTTGATTCTCCAGATGCCTGA 2103 0.4437 MASGEGFLTDEQREMLKIASNNVESLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVSDPLDEFKKAVVSTIEEYFSTGDVDLAASDLREPGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIKDGFFLLLESADDLAVDILDAVDVLALFLARAVVDDILPPAFLARARKALPESSKGFQVIQTAEKSYLSAPHHAELVERRWGGTTHITVEEVKKKISDLLREYVESGDTVEACRCIRELGVSFFHHEVVKRALVLAMETRSAESLMLKLLKEAAEEGLISSSQMVKGFSRFAEGLDDLALDIPSAKTLFPSLVPRAISEGWLDASFLKPSGEDGVIPVEDEEVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSSSETVRMARSLVAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFAFYVEHANNNGWLLPSFDSPDA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1659 700 FunFam Programmed cell death protein 4 271 406 - -
Lele24g1659 700 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Lele24g1659 700 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Lele24g1659 700 ProSiteProfiles MI domain profile. 582 700 IPR003891 -
Lele24g1659 700 SUPERFAMILY ARM repeat 418 575 IPR016024 -
Lele24g1659 700 FunFam programmed cell death protein 4 409 563 - -
Lele24g1659 700 MobiDBLite consensus disorder prediction 86 103 - -
Lele24g1659 700 SUPERFAMILY ARM repeat 119 278 IPR016024 -
Lele24g1659 700 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Lele24g1659 700 Gene3D - 570 697 - -
Lele24g1659 700 Gene3D - 272 403 - -
Lele24g1659 700 MobiDBLite consensus disorder prediction 80 105 - -
Lele24g1659 700 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Lele24g1659 700 SMART ma3_7 420 531 IPR003891 -
Lele24g1659 700 SMART ma3_7 122 233 IPR003891 -
Lele24g1659 700 SMART ma3_7 286 397 IPR003891 -
Lele24g1659 700 SMART ma3_7 583 692 IPR003891 -
Lele24g1659 700 Gene3D - 411 562 - -
Lele24g1659 700 Gene3D - 114 262 - -
Lele24g1659 700 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Lele24g1659 700 FunFam Programmed cell death protein 4 568 698 - -
Lele24g1659 700 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Lele24g1659 700 Pfam MA3 domain 122 233 IPR003891 -
Lele24g1659 700 Pfam MA3 domain 286 397 IPR003891 -
Lele24g1659 700 Pfam MA3 domain 584 691 IPR003891 -
Lele24g1659 700 Pfam MA3 domain 421 530 IPR003891 -
Lele24g1659 700 FunFam programmed cell death protein 4 113 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1659 Lele-ChrLele24 22073776 22076954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1659 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 4.88e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1659 24 22073776 22076954 Lele24g1659 24 22073776 22076954 ECH
Lele21g1715 21 25041332 25044218 Lele24g1659 24 22073776 22076954 hybridization
Lele22g1692 22 22382196 22385322 Lele24g1659 24 22073776 22076954 hybridization