Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1650 ATGTCCGTCGCCTTCACAAGGAAGAGGGAGGAGAAGAAGTCATATTACAAATATAAGGATGAAAGAGAAGACACAGATCTGATCTCAGGGGGAGCATTGGTAGCAGTGGGAGCAGCAGTTGCAATTATTGGCCAGCTTTTGTTCAACATCATCAGTGGAAAGAGATATACTACAGTTCCTCAGTTTCCAAGGCCAGTCCAGCGTCTCCCAAGGCGCTTTAAATCCCGGCGGGTATTTCTGTCAATGCTTGTCTTATCAACGACCAAAGAAGTCCTGCAAACTAGCGTAGTAAGTGGAGAATATACTGTTCACCGTCGTGTTAAATCGCCGTTTAACTTCAAGAAGTTATTTGCTACATTCTCTAGGAGCATAAACAAGATGAGAAAAGTGTGTGTGGAATGTGCCCACAAGTGTCTTTGGATTCACGGAAAGAAGAAAAAAACATCATCAAATGTACCTTGTTCCTTCTTCAAGGTCATGATCGGCAGCGATTTTTCTAAACTTTTGTATCTGCCCCCTAAATTTGGTCCTACAGCGTCAACCTTGGTTCACAAAGAAGCCATTATTGAGGATTCAAGTGGACAACAATGGAAGGTGAAAATATCAGTTGTCGATAAGTCTTGTGCTTTTCAGGAGGGATGGGATGTTTTCTCGTCGGACCATGGGCTTCAAGTTGGACATTTTTTGGTGTTCCATTACATCGGAAGTTCACACTTTTTTGTTAAGGTTTTTGATAAATCTGGGTGTGAAAAGATTGTTTTTCCCACTCAGAGAAAGCAAAAGAAGAGAAAAACGACCACAATTGACCTTGAAGCAACAGATGATTTGTTACATAGACGAGGTTTATTATCCTCGGAGTCCGATACGGGAAAAATGCACAGCATGGACGAGGTTGTTGGAGTGAATAATGCAGAAATTAACGAAGAGGAAACCTCAGAAACTAGTAACAGAAGGATCCAATCTTTGTACAAAGACAAAAACTATGAAGATCCTTGTTACTCGAAAGACCGAGACTTAGGAGACAAAGAAAGAGAGGACATGAGTCCTATGTTTGATGTGTTCAGGTACGAAATATTGAACAATTCAGATGTTCATGGGAGTGGCAAATTTACAAGTAGAAATGAAATGGCTGTTACAAGCAATTATTTCGAAGATCCTTTGCTTGAAGAGATGTTGGGTAATGGAGCAACTCAAGAAGATCCTTTCGAAGTTGAATTAACCAAAAGAAGTCATTTTCTTGAAGAGTTAGACAAGTGTACGTTGTCCTGGGCCTGTGAGAGACATTCTTGTGGGACCAAGATTCCTGAGCATTTTCCATGTACCATGCAACATGAAGAAATCAAACAGAACAATTTCATTATGCCCAAATGGGAAGATCAAAAGTGCCAATTTGCTGGGAATTCAGGGGAAATGGAGAGGAAGATTCAAAAAGAGCTCCTGAACATGACTCCAAATGTGTGCAGTTACCACGATAAACTCCAGTCAATTAATGGAGATCAATGCAGCAATCTCAATTCAGTGAAAGTCGAACCTTCTGACTATGGAGCTGCCCACATGCTTGCATCCATCTCAGAGAAAAACAAGCAAGCAATTAGCAACCAGGAGATGTGGGCACTTTTGGGCAAGATAAGGAGTCCTTGTGTATCTTTGGGGGCAAAATACGATCTTGTGTTGAAATTGTGA 1683 0.4112 MSVAFTRKREEKKSYYKYKDEREDTDLISGGALVAVGAAVAIIGQLLFNIISGKRYTTVPQFPRPVQRLPRRFKSRRVFLSMLVLSTTKEVLQTSVVSGEYTVHRRVKSPFNFKKLFATFSRSINKMRKVCVECAHKCLWIHGKKKKTSSNVPCSFFKVMIGSDFSKLLYLPPKFGPTASTLVHKEAIIEDSSGQQWKVKISVVDKSCAFQEGWDVFSSDHGLQVGHFLVFHYIGSSHFFVKVFDKSGCEKIVFPTQRKQKKRKTTTIDLEATDDLLHRRGLLSSESDTGKMHSMDEVVGVNNAEINEEETSETSNRRIQSLYKDKNYEDPCYSKDRDLGDKEREDMSPMFDVFRYEILNNSDVHGSGKFTSRNEMAVTSNYFEDPLLEEMLGNGATQEDPFEVELTKRSHFLEELDKCTLSWACERHSCGTKIPEHFPCTMQHEEIKQNNFIMPKWEDQKCQFAGNSGEMERKIQKELLNMTPNVCSYHDKLQSINGDQCSNLNSVKVEPSDYGAAHMLASISEKNKQAISNQEMWALLGKIRSPCVSLGAKYDLVLKL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1650 560 SMART B3_2 156 247 IPR003340 GO:0003677
Lele24g1650 560 CDD B3_DNA 155 245 IPR003340 GO:0003677
Lele24g1650 560 Pfam B3 DNA binding domain 156 246 IPR003340 GO:0003677
Lele24g1650 560 PANTHER B3 DOMAIN-CONTAINING 149 353 - -
Lele24g1650 560 Gene3D - 149 249 IPR015300 -
Lele24g1650 560 SUPERFAMILY DNA-binding pseudobarrel domain 154 249 IPR015300 -
Lele24g1650 560 ProSiteProfiles B3 DNA-binding domain profile. 154 247 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1650 Lele-ChrLele24 21982168 21988313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1650 156 279 B3 DNA Binding Superfamily AT5G66980 34.375 9.84e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele24g1650 B3 2.7e-16 CL0405