Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1644 ATGAAGAAGAACAACCACCACCAGCAGCAGAAACAGCAGATAATGATGCTTTACAACAAAGTGAAGAGTGGGAAGTTCAAGAGAAGCAGTTCCAATGTTGAAGAAGATGGAGCTTCTTCTGCTATCCTCTTGCTTGCTTGCATAGCCTACGAAAGGGAAGGCTCAAGATTGTCAACAATGATTCCTCTGTATAGGGCTCTGAAAGGAGATTTAAGTGATTATAATGAGCATATGATAGGCCTTCGTTTTCATAATTCCTCTGTTGGGTACGTTCCCTATCCTCATTTGCTTCCTGTTTTTGAAACCAGAGCTTCTCCTCCACCTTGGAACCTTCCTTTTTCTGAAGAAACCAAAGGAAATAATAATAAGAGGTTGAAGAAATCTCCAAGCATCCCAGAAACACTTGGAGATTACAGAAGCTTTTCTTCAACCAGTGGAAGTGAAGATGGCTATGTCAGTCTCAGCAGAAGCAACAGTGTGAATAGCCTTCCAAAGCTCCATTTCAGAAACCATATATGGACTATTACTCAGAGATACCTTGCTTCTGAAGAGGCTGCACAGAAAGACAGGACGATCAATCCTGAGGTTAGTGGAGCTGAAGAACAAGAAGATCGGTACTGTGCCGATGGGATGAGACTTGTTCAGCTTCTTGTTCATTGTGCTGAAGGTGTGGCTTGTCGTGATAAATCACATTGGTCAACTTTACTAACTGAACTGAGATCAAATGCATCGGTCTTTGGCTCTCCCATTCAGCGAGTGGCTTCTTGTTTCGCCCAAGGGCTATCTGATCGGCTCACGATGGTTCAATCGATTGTGGCCGTGGGGAAAACGGAACCAATGATGAACATTATGGACATAGCCTCAGAAGAAATTGAACAAGCATTTAAATTGCTTTGTGCAAGTGGTGGACCTTGGGATGACTCTTGGTCCTCCCCATGGCCACCAATGGAGGGGACTGATTCAGAGCCTGTTAGCCGATTCGCCTCCTCCGAATTACAGGGGTTGATCTTTGTGTTGAGAAACTCAAGCTTATTGATAAAGAACTTGAACTTTATGCTCATAACTTGGGGGATTAATCTGGAGTTCTCTCTGGTGGGAAAGAACTTAGAAACCTTGCATACTGATGACATTAAGGTGAATGAAGAGGAGGTTCTGGTGGTTAATAGCATTTTTCAGTTGCACTGTGTCGTGAAAGAGATTCGTGGGGCTTTAAACTCAGTGCTTCAGACGTTTCATAAACTCACCCCAAACGTGTTGGTTAAGGTTGAGCAGGACTCGAGCCATAATGGACCCTTTTTCCTTGGGAGGTTCATGGAAGCGCTTCATTATTACTCTGCCGTTTTTGACTCTTTGGATGCCATGTTACCTACGTATGACACTAAGAGAGCAAAAATAGAACAGTTATATTTTGCAGAAGAGATAAAGAACATTGTCAGTTGTGAAGGACCGGCAAGGGAGGAGAGGCATGAGAGGGAGGACCAGTGGCAGCGGAGGATGAGTAGGGCTGGGTTTCACAGGACGCGCCGATGA 1530 0.4438 MKKNNHHQQQKQQIMMLYNKVKSGKFKRSSSNVEEDGASSAILLLACIAYEREGSRLSTMIPLYRALKGDLSDYNEHMIGLRFHNSSVGYVPYPHLLPVFETRASPPPWNLPFSEETKGNNNKRLKKSPSIPETLGDYRSFSSTSGSEDGYVSLSRSNSVNSLPKLHFRNHIWTITQRYLASEEAAQKDRTINPEVSGAEEQEDRYCADGMRLVQLLVHCAEGVACRDKSHWSTLLTELRSNASVFGSPIQRVASCFAQGLSDRLTMVQSIVAVGKTEPMMNIMDIASEEIEQAFKLLCASGGPWDDSWSSPWPPMEGTDSEPVSRFASSELQGLIFVLRNSSLLIKNLNFMLITWGINLEFSLVGKNLETLHTDDIKVNEEEVLVVNSIFQLHCVVKEIRGALNSVLQTFHKLTPNVLVKVEQDSSHNGPFFLGRFMEALHYYSAVFDSLDAMLPTYDTKRAKIEQLYFAEEIKNIVSCEGPAREERHEREDQWQRRMSRAGFHRTRR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1644 509 MobiDBLite consensus disorder prediction 483 509 - -
Lele24g1644 509 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 169 273 IPR005202 -
Lele24g1644 509 MobiDBLite consensus disorder prediction 483 500 - -
Lele24g1644 509 MobiDBLite consensus disorder prediction 114 128 - -
Lele24g1644 509 Pfam GRAS domain family 355 506 IPR005202 -
Lele24g1644 509 Pfam GRAS domain family 213 280 IPR005202 -
Lele24g1644 509 ProSiteProfiles GRAS family profile. 204 509 IPR005202 -
Lele24g1644 509 MobiDBLite consensus disorder prediction 111 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1644 Lele-ChrLele24 21956940 21959718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1644 194 506 GRAS Transcription Factor Family AT2G29060 27.606 1.35e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele24g1644 GRAS 3e-46 CL0063