Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1626 ATGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCCTCTTCGGATGATAACCCTCCCTCACCGAAGCGTCAAAAGGCTGAAAATGGTGGTCCGTCGGAGAAACCGAAGCCGGCCGCGGAGAATTCTAAAGAAGTAAGTACCCCTGAGCCGGCGGCTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGAATTGGTGATGTTCTGACTTCTGGCAAGGGTGATGCTGCGGCGGCTGTCGCTGCGGCGCTGCCGATCGATGATGGGTCTTCGCCGACTTTGGTGGCTGATAAGCCAAGGGGTTCTTTGTCTTCGTGGAATATATATCAGAAGCAAAGTCCAAGTTCTGAGACCTCGGCGCCTTGGTGCAGGCTCCTGTCGCAGTCTTCCCTGAACCCAAATGTTTCCATTTGCACCCCCAACTTCACTATTGGTTCCAGTAGAAATTGCAACTTTCCTTTGAAGGATCAGACTATAAGTGGAAATCTGTGCAAGATTAAGCATACCCAGCGTGAGGGATGTGCTGTAGCCTTGCTAGAGAGTACGGGTAGCAAAGGATCTGTGCTAGTTAATGGGACACTTGTCAAGAAGAACACCAGCTGTGTGCTTAGTTCGGGTGATGAAGTGGTCTTTGGTTTGCTGGGAAATCATTCTTATATCTTTCAGCAGCTAAATGCTGACGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGTAGGGAAATCTCTGCAGCTTGAAAGGAGAACAGGAGACCCCTCTGCTGTTGCAGGGGCTTCCATTCTAGCTTCTCTTTCTAGCTTCAGACAACAAGATATCTCGAGATGGAAATCTCCGTCTCAGAATACTAATAAAGCTCATCAGGGTACTGATGCCTCTGCTCATTCTGCTCATCATGATAATACAGAAATTGAGCTTGATGGTCCGGAAGGCAACTCAGCTCCAAATGTAGAGAGTGATAAAGCAGCTGACGTTGGAGCAAGTGACAAGAATCATCCAATGGAATGCAATCCAGATGCTAGCACGGAGGCAGGCAATGTATTGGAAGAAAGAATTGGGACGAGGGATATGCTGGCACCATCAACCTCGGGTATGTCTGTACGCTGTGCGGTGTTCAAAGAAGATGTTCATGCTGCAATATTGGATGGAAAAGGCATAGAAGTGTCGTTTGACAACTTCCCATATTATTTAAGTGAGAACACAAAAAATGTCCTGGTTGCAGCTTGCTTTATTCACCTGAAGCACAAGGAACATGCAAAATACACATCAGATCTTACAACCATCAACCCACGTATTTTACTTTCTGGACCTGCAGGGTCAGAAATATATCAAGAGATGCTGGCAAAAGCACTTGCTAATTACTTTGGAGCTAAGTTGCTCATATTTGATAGCCATTTGCTTCTGGGTGGTTTATCATCCAAGGAAGCAGAGCTACTCAAAGATGGATTTATTGTTGAAAAAATCTGCAGCTGCTCCAAGCAAAGTTCTACAGCCGCCGACCTGGCTAGGAACATGGACCCATCAACTAGTGAAACAGATACACCTAGCCCTTCAAACGTACCTACTTCATATGGCCTTGAATCTCAGCCCAAAACTGAGACGGATGCCACACCTTCCACTTCTGGGACAACTAAAAATTGTTTGTTTAAAATAGGTGACAGGGTGAAATATAGCTGCTCATCTTCTGGTGGTTTGTATCAGACATCTTCGAGGGGCCCGCCGAATGGAAGTCGGGGGAAGGTTGTCTTATGTTTTGACGATAATCCTTTGTCAAAAATTGGTGTAAAATTTGATAAGCCCATACCTGATGGAGTTGATCTTGGAGGTGCCTGCGAGGGAGGTCAAGGATTTTTCTGCAATGTTAGTGATCTTCGATTGGAAAACAATGGTGTGGATGAGTTGGACAAATTACTTATCAACACGTTATTTGAGGTTGTTTATAGTGAGAGCAGAACTGCACCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATCCATATTCATTTAAAAGTAGGCTTGAAAAGCTTCCAGACAATGTGGTTGTTATAGGCTCGCATACTCACACTGACAGTCGGAAGGAGAAGTCACATCCAGGGGGTTTGCTTTTTACGAAATTCGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTCCCTAATAAAGTTACAATTCACATGCCACAGGATGAGTCACTTCTAGCATCCTGGAAGCAGCAGCTGGATCGAGATGCTGAGACTCTAAAAATCAAAGCAAATTTGCATCACCTGCGCACAGTTTTTAGTCGTTGTGGGATGGAATGGGAAGGACTTGAGTCTTTGTGCATTAAAGACCAGGCGCTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCACCTCATGCAAAACCCTGAAGCCGATCCTAATTCAAAACTTGTATTGTCCTGTGAAAGCATCCAGTATGGAATTGGGATCCTGCAGGCCATTCAAAATGAGTCCAAGAGCTTGAAGAAGTCTCTGAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTGTTGGCTGATGTAATTCCTCCTAGTGACATTGGTGTTACTTTTGATGATATCGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTGGTGATGCTTCCCTTGCAAAGGCCGGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGGCCCCCGGGAACAGGAAAGACGATGCTTGCAAAGGCCGTGGCCACTGAAGCTGGTGCTAACTTCATCAACATTTCCATGTCAAGCATTACATCGAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTCTTCTCTCTAGCCAGTAAAATTGCTCCTAGTGTTATTTTTGTTGATGAAGTTGACAGCATGTTGGGAAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGCAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAGCGAGTTCTTGTACTTGCAGCCACTAATAGACCTTTCGACCTTGATGAGGCTGTCATCCGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCCGATGCTCCAAATAGAGCGAAAATATTGAAAGTTATACTAGCTAAAGAGGACTTATCTCCTAACGTTGACTTCGATGCAATTGCCAGTATGACTGATGGATATTCTGGAAGTGATCTGAAGAATCTTTGTGTGACTGCTGCACATTGTCCAATTAAAGAGATACTAGAGAAGGAAAAAAAGGAGCGTGTTGCTGCTCTAGCAGAAGGCAAACCTCCTCCGGCATTAAGTGGCAGTGCTGATGTGCGGTCTTTAAACATGGAGGATTTTAAAGATGCTCATGAACGGGTATGTGCGAGTGTTTCCTCTGAATCCGTAAATATGACCGAGCTCTTACAATGGAACGAACTATATGGCGAAGGTGGTTCGAGAAGAAAGAAAGCACTCAGCTATTTCATGTGA 3618 0.4489 MVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKAENGGPSEKPKPAAENSKEVSTPEPAADPGECDAQIAGDGIGDVLTSGKGDAAAAVAAALPIDDGSSPTLVADKPRGSLSSWNIYQKQSPSSETSAPWCRLLSQSSLNPNVSICTPNFTIGSSRNCNFPLKDQTISGNLCKIKHTQREGCAVALLESTGSKGSVLVNGTLVKKNTSCVLSSGDEVVFGLLGNHSYIFQQLNADVAVKGAEIQGGVGKSLQLERRTGDPSAVAGASILASLSSFRQQDISRWKSPSQNTNKAHQGTDASAHSAHHDNTEIELDGPEGNSAPNVESDKAADVGASDKNHPMECNPDASTEAGNVLEERIGTRDMLAPSTSGMSVRCAVFKEDVHAAILDGKGIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTSDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKDGFIVEKICSCSKQSSTAADLARNMDPSTSETDTPSPSNVPTSYGLESQPKTETDATPSTSGTTKNCLFKIGDRVKYSCSSSGGLYQTSSRGPPNGSRGKVVLCFDDNPLSKIGVKFDKPIPDGVDLGGACEGGQGFFCNVSDLRLENNGVDELDKLLINTLFEVVYSESRTAPFILFMKDAEKSIVGNGDPYSFKSRLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVTIHMPQDESLLASWKQQLDRDAETLKIKANLHHLRTVFSRCGMEWEGLESLCIKDQALTNENAEKIIGWALSHHLMQNPEADPNSKLVLSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPNVDFDAIASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKERVAALAEGKPPPALSGSADVRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1626 1205 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 379 1204 - -
Lele24g1626 1205 CDD FHA 130 230 IPR000253 GO:0005515
Lele24g1626 1205 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 899 1075 - -
Lele24g1626 1205 Gene3D - 1073 1167 - -
Lele24g1626 1205 Gene3D - 129 238 - -
Lele24g1626 1205 Pfam AAA+ lid domain 1094 1129 IPR041569 -
Lele24g1626 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 1181 IPR027417 -
Lele24g1626 1205 MobiDBLite consensus disorder prediction 279 298 - -
Lele24g1626 1205 MobiDBLite consensus disorder prediction 299 313 - -
Lele24g1626 1205 CDD AAA 939 1072 - -
Lele24g1626 1205 ProSitePatterns AAA-protein family signature. 1044 1063 IPR003960 GO:0005524|GO:0016887
Lele24g1626 1205 Coils Coil 861 881 - -
Lele24g1626 1205 MobiDBLite consensus disorder prediction 507 549 - -
Lele24g1626 1205 MobiDBLite consensus disorder prediction 1 71 - -
Lele24g1626 1205 SUPERFAMILY SMAD/FHA domain 113 225 IPR008984 GO:0005515
Lele24g1626 1205 Gene3D - 899 1180 IPR027417 -
Lele24g1626 1205 Pfam FHA domain 151 220 IPR000253 GO:0005515
Lele24g1626 1205 Pfam ATPase family associated with various cellular activities (AAA) 941 1070 IPR003959 GO:0005524|GO:0016887
Lele24g1626 1205 SMART AAA_5 937 1074 IPR003593 -
Lele24g1626 1205 MobiDBLite consensus disorder prediction 279 348 - -
Lele24g1626 1205 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1626 Lele-ChrLele24 21856769 21867128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1626 900 1152 Calmodulin-binding Proteins AT3G56690 39.615 4.49e-41 162