Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele24g1612 | ATGGAGAATCACCAGCAAGCTCCACCCTCCTCCGCATACCAACCTCAGCCTCCTGCTCCTCCTTCTTCCTTCCACCACCTTCTTCAACAGCAACAACTCCAGCTTCACACCTTCTGGAACACCCAGCGCCAAGAGATCGAACATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATTCGATCCTGGATCCACGCCGAAGAGAACAAGAGGCGCACTCTTCAGAAGAACGACATCGCTGCTGCCATCACCCGCACTGATATTTTCGATTTCTTGGTCGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGCCCTTGGTGGAATGATGGCGGCCCCCGCCAGCGGTATTCCTTACTACTATCCGTCTATGGGCCAACCTGCCGGCGCTCCTGGTGGCATGTTGATTGGACGGCAGGCGGTGGATCCCACCGGATTGTACGCGCAACCGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGATGGCGCCGGATGATGGGTCCTACGGAAGCGGCGGGAGCAGTGGACAGGGCAATCTGGACGGTCAGAGGTAG | 663 | 0.5762 | MENHQQAPPSSAYQPQPPAPPSSFHHLLQQQQLQLHTFWNTQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMMAAPASGIPYYYPSMGQPAGAPGGMLIGRQAVDPTGLYAQPPSQAWQSVWQMAPDDGSYGSGGSSGQGNLDGQR | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele24g1612 | 220 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Lele24g1612 | 220 | Gene3D | Histone, subunit A | 22 | 134 | IPR009072 | GO:0046982 | |
| Lele24g1612 | 220 | MobiDBLite | consensus disorder prediction | 204 | 220 | - | - | |
| Lele24g1612 | 220 | MobiDBLite | consensus disorder prediction | 195 | 220 | - | - | |
| Lele24g1612 | 220 | FunFam | Nuclear transcription factor Y subunit gamma | 24 | 134 | - | - | |
| Lele24g1612 | 220 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 30 | 146 | - | - | |
| Lele24g1612 | 220 | Pfam | Core histone H2A/H2B/H3/H4 | 24 | 119 | IPR007125 | GO:0003677 | |
| Lele24g1612 | 220 | SUPERFAMILY | Histone-fold | 20 | 128 | IPR009072 | GO:0046982 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele24g1612 | Lele-ChrLele24 | 21739334 | 21739996 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele24g1612 | 22 | 219 | CCAAT-HAP5 Transcription Factor Family | AT3G48590 | 84.804 | 1.12e-105 | 302 |
Transcription factors information