Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1610 ATGGAATGTAATAAAGACGATGCCCTTAGGGCTAAGCAGCTTGCAGAGAAGAAGTTTCTGGAGATGGACCTTGCTGCTGCAAAAAGATTTGCCTTGAAAGCTCAAGACTTGCATCCAGGTCTTGATGGTCTTTCTCAACTGCTGGCAACTCTTGAGGTGTATGTCTCTGCTGAGAAAAGAATAAATGGAGAAATCGATTGGTACAAGGTCCTTGGAGTGGATCCCTTGGCTGATGATGAAACAATTCGAAGGCATTATAGGAAAATGGCTCTTACTCTGCACCCTGATAAAAACAAATCTGTTGGTTCTGATGGGGCATTTAAACTTATCTCTCAGGCATGGAGTTTGTTTTGTGATAAAGACAAGAGAATGTTCTATGACCAAAGGCACAACTGGGGTTCATTTCAAGAAGTTTCAAATCGGAAGCCTTTTGCACCAGCAAGTCAGAATGGTTTCTTTAATATGTTCAATACTGCTAACTGGAAGGCTAAGGACCATGCAACTGCCGATCATCCAAATCCTAGTCCAGTGCCTCCTGTGGTATTGAAGCAATCATTCTGGACCATTTGTGGTATTTGCAGAACACACTTTGAGTACCCTACAGTTTATATCAACTGCAACCTTATGTGCACCCATTGTAATAAGCCCTTTTTGGCCAGAGAGACACCGCGCCCACCTATATTACGCAATGCTCCTCGTGTAGAGACAGAGAAAAAGAAATTTAAACCAACAAGAATGGAAGAAAATGGTTTTGTTTCTGGACAGACACCGGCTTCTTCCATTAATTCACTAGAAAACTTATATGGGTCCAAACCTTTCACTATGCCTGGAGGTACTGCCAATTTTCCGAGATCAGCTTCTTCTACTGCTGAAGCTCCTAGTACTTTTGGGGTCACATCTGTGAATTTGAAGAGAGGGCGTGAGGATATATCACTTCCTACCATGATGGGAAAGGCCCATTGTGGGAAAACTCATGCTGCTGTGACAACTGCTTACAATCCAGCTTCTCAGTTTCCTTCTTTTTATTCAAATGCATCACCTCCTACCATGATGGGAAAAGCCCATTGTGAGAGAACTCATGCTGCTGAAACAACTTCTTACAATCCAGCTTCTCAATTTCCTTCTTGTTATTCAAATACATCGCCTCCTCCCATGATGGGAAAAGCCCATTGTGGGAAAACTCATGCTACTGAGACAACTGCTTACAATCCAGCCTCTCAATTGCCTTCTTTTGGTTTGAATACATCGCCTCCTACCATGATGGGAAAAGGCCATTGTGGGAAAACTCATTCTGCTGAGACAACTGCTTACAATCCAGCTTCTCAATTGCCTTCTCTTGGTTCAAATACAGCCCTGAAAGAAGATAGGCCAAGGAAAAAAAGGAGCATTGATGAGCATAGAGATGATAGTGATAGAAGAGAGGTGGAAACCAAAACGCCATCTCAAACTGAAGGAATAAGGCCGGCTGGTGAATATGGACCTTTGAAGGGTAATATTGGCACAAGAAGGGTTAATCCTGTGGGAAACTATAAACGTAATGGTATGAGGGATATGTCCCAGCAGAAATTGAAGATGGTATTGATGGAAAAGGCTAGGAATGATATTCGTAGTAAGCTTAAAGAATTGAATTTTGATGTGCCAAGAAAGATAGACAAGTCAAAAAACCCTGATAAGAATGCCCAGGAGAAGGACACTGAAAGGTCTAGAAATGGTGTGGAAAGAATTCAAGGATTTGTTGACTCCGAGACAACAGCCAAAAAGTCTTCCTCTGCTGATCCTGATGTGTGTACTTTGGAGGTGGCTGATTCTCTGTCTATGAGTGTTCCAGACCCAGACTTCCATAATTTTGATAATGACCGAAGGGAGAAATCATTCGGGGAGAACCAGGTTTGGGCTGCTTATGATGATGACGATGGCATGCCTCGCTACTATGCTTTGATTCATATCGTAATATCCCGCAAACCTTTCAAAATGAGGATGAGTTGGCTTAACTCTAAAAGCAATGATGAATTGGCCCCAATAAAGTGGGTCAGTTATGGCTTTCCAAAAACTTCTGGCGATTTCTGGATAGGCAAGCAAAAATTGAATGGCTCTCTTAATTCCTTCTCTCACAGGGTTAAGTGGACCAAAGGCACTAGAGGGGTCATACAAATATATCCCAAGAAGGGTGATGTTTGGGCTCTATATAGAAATTGGTCCCTTGACTGGAATGAACTCACTCCCGATGAAATTGTACAAAAATATGACATGGTGGAAGTGCTTGAAGACTACAATGAGGAGCAAGGTGTGAATGTTGCTCCACTCATTAAAGTTGCCGGTTTCAAGACAGTATTTCGCCGGCATGCTGATTCAAGGAAGATCAAGAATGTTCCAAGAGATGAGATGTTTCGTTTCTCACACCAGGTTCCTTGTTATTCACTTACCAGTCAAGATGGACACAATGCCCCTCAAGGTTGCTTGGAGCTTGATCCTGCTGCTGTACCTATGGAACTTCTTCAGGTAGTAACAGAAGATCTGGAGACCGTAACAAAAGTTGAAAATTCTTCAGAAGATAGATTGGAGGGTAGAGAGATTCCAACGGATGGTGGTGACTTGGTCAGGAGCTGCCAGCCGACTAAGGAAGAAGACATTCCAAAAAAGTGTAAAAGCGAAACCAACGACTTCCTTTCAAATCGAATACAGGATAAAGCCCAACTTAAAATGGAGCTTGAAGTATGCTTACACATCTGTTGTACAGAACCTAGAATGAACGAGAGCTTGGCGTGGGGATATGCGTTGGAGGGTGAAATTTTGCCTTCAAGGTTTAAAAAAGGATATGGTTTTGACTTTCAACATATATTTTCCATTTAA 2850 0.4232 MECNKDDALRAKQLAEKKFLEMDLAAAKRFALKAQDLHPGLDGLSQLLATLEVYVSAEKRINGEIDWYKVLGVDPLADDETIRRHYRKMALTLHPDKNKSVGSDGAFKLISQAWSLFCDKDKRMFYDQRHNWGSFQEVSNRKPFAPASQNGFFNMFNTANWKAKDHATADHPNPSPVPPVVLKQSFWTICGICRTHFEYPTVYINCNLMCTHCNKPFLARETPRPPILRNAPRVETEKKKFKPTRMEENGFVSGQTPASSINSLENLYGSKPFTMPGGTANFPRSASSTAEAPSTFGVTSVNLKRGREDISLPTMMGKAHCGKTHAAVTTAYNPASQFPSFYSNASPPTMMGKAHCERTHAAETTSYNPASQFPSCYSNTSPPPMMGKAHCGKTHATETTAYNPASQLPSFGLNTSPPTMMGKGHCGKTHSAETTAYNPASQLPSLGSNTALKEDRPRKKRSIDEHRDDSDRREVETKTPSQTEGIRPAGEYGPLKGNIGTRRVNPVGNYKRNGMRDMSQQKLKMVLMEKARNDIRSKLKELNFDVPRKIDKSKNPDKNAQEKDTERSRNGVERIQGFVDSETTAKKSSSADPDVCTLEVADSLSMSVPDPDFHNFDNDRREKSFGENQVWAAYDDDDGMPRYYALIHIVISRKPFKMRMSWLNSKSNDELAPIKWVSYGFPKTSGDFWIGKQKLNGSLNSFSHRVKWTKGTRGVIQIYPKKGDVWALYRNWSLDWNELTPDEIVQKYDMVEVLEDYNEEQGVNVAPLIKVAGFKTVFRRHADSRKIKNVPRDEMFRFSHQVPCYSLTSQDGHNAPQGCLELDPAAVPMELLQVVTEDLETVTKVENSSEDRLEGREIPTDGGDLVRSCQPTKEEDIPKKCKSETNDFLSNRIQDKAQLKMELEVCLHICCTEPRMNESLAWGYALEGEILPSRFKKGYGFDFQHIFSI 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1610 949 MobiDBLite consensus disorder prediction 437 514 - -
Lele24g1610 949 Gene3D DnaJ domain 64 169 IPR036869 -
Lele24g1610 949 MobiDBLite consensus disorder prediction 237 256 - -
Lele24g1610 949 Pfam Domain of unknown function (DUF3444) 604 810 IPR024593 -
Lele24g1610 949 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele24g1610 949 MobiDBLite consensus disorder prediction 546 592 - -
Lele24g1610 949 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Lele24g1610 949 CDD DnaJ 66 119 IPR001623 -
Lele24g1610 949 Pfam DnaJ domain 66 127 IPR001623 -
Lele24g1610 949 MobiDBLite consensus disorder prediction 546 573 - -
Lele24g1610 949 PANTHER BNAC03G44070D PROTEIN 1 828 - -
Lele24g1610 949 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele24g1610 949 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele24g1610 949 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele24g1610 949 MobiDBLite consensus disorder prediction 452 480 - -
Lele24g1610 949 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1610 Lele-ChrLele24 21727866 21733687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1610 4 261 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.030 7.22e-27 111