Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1604 ATGAAAGCAGCATCATGGGATTTGGGTGAATTTGATGAAACAACAGGCTTAGCCAGCATAGAAGAAACAATTGATGGGTCAAGCAGAAGATTTGGAAGTGATGATAGAAGTAATAAAGGGGGATTTTCTGTGGATTTGAAGCTTGGTACTCAAGTGGGGAATTCTAGTAGTAGTAGTGAACCACAAGTTTCTAAGTGGAAAGATGTTGTTGGAGGAGTCTCTAAAGTGATGACGACGACATCTTCTTCATTATCGTCTTCCTCAGGATCATCTAAGAGAGCTCGAGCAATTAACAAGGCAAACCAGACAGTTTCATGCCTTGTAGATGGGTGCAATTCAGATCTTAGTGATTGTAGGGACTATCACAGGCGCCATAAGGTCTGTGAACTCCATTCTAAGACTCCAGTGGTCACAATTAATGGCAACAAGCAAAGGTTTTGTCAACAGTGTAGCAGGTTTCATTCGCTAGAGGAATTTGATGAAGGGAAGAGGAGTTGCAGGAAGCGTTTAGATGGGCACAACCGACGGAGGAGGAAGCGGCAGGGAGAAGGAGGAGGGGGAGGGAGATCTGGAAGCATTTTGACAAATTACAAAGGCACCCACTTGTTGCCCTTCTCCAGCTCACATGTGTATCCTTCCACTGCCATGGCTCACCCTCCTTGGAATTCATCAGATGTAGGGCTCCACCACAACCCTCACCATCATCATCATCATCATCAACTCCATCACTGGGTTGATCATAAACAGGACCTCTTTCTGGGATCATCGTCGTCATCGCCATCATCATCATCATCTTATTCAGAAGCAAGTAATAATAACAACATCATTAATGCTAACAAGCATCGGCAGCTAGCATTCTTGCAAGGTGACAACTCAACAACAATGGAGAACAACAATCAGCAAGATCTACCACCACCACCTGCTTCTGTGTGCCAAACGTTTCTGAGAGCCACGCCATTGCCAGCAGCTCCACCAATTCACGGCGGCGACCGCCATGATTCTCACTGTGCTCTCTCTCTTCTGTCATCCCCACAGACGCACACAAGTGGGAATGGTTTGAGCCAAATGCAGCCTCATCAACAAGCCATGTCGATTATGCAGCAGCACCAACCCTTAGGACTGAGCCTGCATGATCGTGGCCTCGAGACGGTGGACCCTACGGTCTTGGTTCACCATGGCAGTGACCATTGTCCGACTTTGTATAACATGAATGAGGCCCGTCCTCCATTTCCTTTTCATTGGGAATAG 1248 0.4679 MKAASWDLGEFDETTGLASIEETIDGSSRRFGSDDRSNKGGFSVDLKLGTQVGNSSSSSEPQVSKWKDVVGGVSKVMTTTSSSLSSSSGSSKRARAINKANQTVSCLVDGCNSDLSDCRDYHRRHKVCELHSKTPVVTINGNKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKRQGEGGGGGRSGSILTNYKGTHLLPFSSSHVYPSTAMAHPPWNSSDVGLHHNPHHHHHHHQLHHWVDHKQDLFLGSSSSSPSSSSSYSEASNNNNIINANKHRQLAFLQGDNSTTMENNNQQDLPPPPASVCQTFLRATPLPAAPPIHGGDRHDSHCALSLLSSPQTHTSGNGLSQMQPHQQAMSIMQQHQPLGLSLHDRGLETVDPTVLVHHGSDHCPTLYNMNEARPPFPFHWE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1604 415 MobiDBLite consensus disorder prediction 19 64 - -
Lele24g1604 415 FunFam Squamosa promoter-binding-like protein 14 97 167 - -
Lele24g1604 415 SUPERFAMILY SBT domain 104 182 IPR036893 GO:0003677|GO:0005634
Lele24g1604 415 MobiDBLite consensus disorder prediction 170 193 - -
Lele24g1604 415 Pfam SBP domain 106 179 IPR004333 GO:0003677
Lele24g1604 415 Gene3D - 97 167 IPR036893 GO:0003677|GO:0005634
Lele24g1604 415 ProSiteProfiles Zinc finger SBP-type profile. 103 180 IPR004333 GO:0003677
Lele24g1604 415 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 53 384 IPR044817 GO:0003677
Lele24g1604 415 MobiDBLite consensus disorder prediction 48 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1604 Lele-ChrLele24 21695923 21698912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1604 1 415 SBP-box Gene Family AT5G50670 37.762 3.47e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele24g1604 SBP 2.2e-30 No_clan