Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1595 ATGAATTTTGTTAGAAATGGAGTTAGCAGATTGCCTCCTGGTTTTCGGTTCCAGCCAACAGACCAAGAGCTCGTTTTTCAGTACTTGAAATGCAAGATCTTCTCCCTTCCCTTGCCTGCTACCATTATCCCTGACCTCAATCTCTGCAACTTCGATCCTTGGGATTTGCCAGGTAACTCTGATGAGGAAGAGAGGTATTTTTTCAGTCCAAAGGAAGCAAAATATCGGAATGGGAATCGCATGAACCGAACAACCATCTCTGGATATTGGAAGGCAACAGGATCCGACAAGAAAATCACCTCATCATCAATGAACAACGACATCGTCGGCATAAGAAAAACCCTTGTTTTCTACGAAGGGAATTCCCCAAACGGCTCTAAAACTGATTGGATCATGCACGAATATCGTCTTGTAACTGCTTCCAAGTCCGAGGAGGTCGGAGACAGGGTTCTGTGTCGAATATCCCTAAAGAAAACAAACAATAATGGTGGGGATACGAGGAGGAGGACGAGGAGTCACGTACAGAATAATAATAATAATAATAATGGACAAGACATGGTAGGCCAACCAAGATTCTTTGACTGTATGATGCTACAAAACCAAAACCTGCATGCTTCAACATTATCGTCGTCTTGTTCAAGCTCCAATGGTTATGTATCAGATCATGAAGAAACAAGTGGATATACTGGTTTCTAA 696 0.4239 MNFVRNGVSRLPPGFRFQPTDQELVFQYLKCKIFSLPLPATIIPDLNLCNFDPWDLPGNSDEEERYFFSPKEAKYRNGNRMNRTTISGYWKATGSDKKITSSSMNNDIVGIRKTLVFYEGNSPNGSKTDWIMHEYRLVTASKSEEVGDRVLCRISLKKTNNNGGDTRRRTRSHVQNNNNNNNGQDMVGQPRFFDCMMLQNQNLHASTLSSSCSSSNGYVSDHEETSGYTGF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1595 231 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Lele24g1595 231 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Lele24g1595 231 SUPERFAMILY NAC domain 7 157 IPR036093 GO:0003677|GO:0006355
Lele24g1595 231 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Lele24g1595 231 PANTHER NAC TRANSCRIPTION FACTOR 56 11 195 - -
Lele24g1595 231 MobiDBLite consensus disorder prediction 160 186 - -
Lele24g1595 231 MobiDBLite consensus disorder prediction 209 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1595 Lele-ChrLele24 21608891 21609898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1595 1 162 NAC Transcription Factor Family AT5G13180 62.805 2.70e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g1595 NAM 1.1e-34 No_clan