Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1592 ATGGGTTGCGTGCTCGGAACGCCGGCGGATGGAGGAGGCCGACGGTCGGATTCGGGGCCTCAGTTTCACCGTGGTCGTGCTAGTCAACGAAATTCTGTCACTGTCGGAGGTAATGCCGTTGTGGTTAGGAAGGAAGGGGCAGCGAGGGAGAAGGACAAGCAGGAGACTCGGCATACCGGCGATTTCCCCGGGACTGTTCCGGCTCTGGAGAGACGGAAACCTAGGCTTGATCCATACGCTAAAACCGAACATGGTTGGCCGTCGTGGTTGATGGATGTGGCCGGGGACGCTATCCGAGATTGGTCTCCACGTCGCGCCAACTCGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTATATAAAGCTAGGGACCTTCTTACTGGAAAGATAGTGGCACTAAAGAAAGTTAGGTTTGATAATATGGAGCCAGAGAGCGTGAAGTTCATGGCAAGAGAAATTATTCTGCTGAGGCGGCTTGATCACCCCAATGTCTTAAAACTTGAAGGTTTGGTCACTTCAAGAATGTCATGCAGTCTATACTTAGTATTCGAGTATATGGAACACGATCTCGCTGGGCTTGCAGCTCGCCAAGGTGTTAAGTTTACCGAGCCTCAGGTGAAATGCTATATGAATCAATTACTCTCCGGCCTTGAGCATTGCCACAGTCGAGGTGTTTTGCACCGTGATATAAAGGGTTCCAATCTGCTCATCGATAATGAAGGAATCCTTAAAATAGCCGATTTTGGACTAGCCACTTTCTATGATTCTGAGAAAAAGCAGCCCATGACAAGTAGAGTTGTCACCCTTTGGTACAGACCTCCTGAGCTTCTTCTTGGGGCTACACTCTATGGTGTTGGTGTTGACCTATGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAACTGCACAAAATATTTAAATTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAGTATAGATTGCCAAATGCCACACTCTTTAAGCCACAGCAGCCTTATAATCGTTGCCTCTCAGAAACCTTCAGAGATTTCCCGCCTTCTTCCTTACCTCTAATAGAAACTCTTCTTGCAATAGATCCAGATGATCGTGGCACTGCATCTACTGCTCTATCTAGTGAATTCTTTGCAACCGAGCCCTATGCTTGTGAACCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAAGCTCAAAGTGGGAAAGCTAATGTTGTTGATGGTGCTCGAAGAGTCAAAACACGTGATCGTGGTCGGGCCGTTCCAGCTCCAGATGCCAATGCAGAGTTGCAAACAAACATAGATAAGTGGAGAGCTGTGACCCATGCAAATGCCAAAAGCAAGAGTGAGAAATTTCCACCTCCACATCAAGATGGAGCTGTTGGATATCCAGTAGATTCATCCCATAAAGGACCTGTTTCATTTGGTGCCACTGATGCTTCTTTTAGCTCAGCAATATTTAATTCGAAAGTATCAGGAACTGTTAGGAATCATGCTTCTACAACTACAAGAAGACCTCGAAGTTACAGAGGGAGGAAAACTAATAAAGCAGACACCCAGATGGCGTCATCATGGAGATTTATGCGAGCCTTTAAACCATCATCAATTGGCCCATCAATGAACATATTATTTAGGAGCAAATAA 1734 0.4648 MGCVLGTPADGGGRRSDSGPQFHRGRASQRNSVTVGGNAVVVRKEGAAREKDKQETRHTGDFPGTVPALERRKPRLDPYAKTEHGWPSWLMDVAGDAIRDWSPRRANSFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNMEPESVKFMAREIILLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAARQGVKFTEPQVKCYMNQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDSEKKQPMTSRVVTLWYRPPELLLGATLYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYNRCLSETFRDFPPSSLPLIETLLAIDPDDRGTASTALSSEFFATEPYACEPSSLPKYPPSKELDVKLRDEEARRQKAQSGKANVVDGARRVKTRDRGRAVPAPDANAELQTNIDKWRAVTHANAKSKSEKFPPPHQDGAVGYPVDSSHKGPVSFGATDASFSSAIFNSKVSGTVRNHASTTTRRPRSYRGRKTNKADTQMASSWRFMRAFKPSSIGPSMNILFRSK 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1592 577 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1592 577 Gene3D Phosphorylase Kinase; domain 1 95 191 - -
Lele24g1592 577 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Lele24g1592 577 FunFam probable serine/threonine-protein kinase At1g54610 192 433 - -
Lele24g1592 577 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1592 577 MobiDBLite consensus disorder prediction 526 549 - -
Lele24g1592 577 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Lele24g1592 577 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Lele24g1592 577 CDD STKc_CDK9_like 109 393 - -
Lele24g1592 577 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1592 577 MobiDBLite consensus disorder prediction 22 36 - -
Lele24g1592 577 MobiDBLite consensus disorder prediction 422 451 - -
Lele24g1592 577 Gene3D Transferase(Phosphotransferase) domain 1 192 433 - -
Lele24g1592 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Lele24g1592 577 MobiDBLite consensus disorder prediction 44 59 - -
Lele24g1592 577 MobiDBLite consensus disorder prediction 1 70 - -
Lele24g1592 577 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1592 Lele-ChrLele24 21589803 21593512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1592 101 429 Core Cell Cycle Gene Families AT5G10270 51.705 1.34e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele24g1592 Pkinase 3.8e-68 CL0016