Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1589 ATGAAAGAGTCGGAGAACGATATTGTCAACGTCTCCATTCGGCTTCTTTCTTCTCTTCTGGATGAGATTCCCACTGTTGTTAACTTTAAAGGTAAATGGTCTCTAATTAGAGCCAAACTCTTCGATCTTCAGACTCAGCTCACCGATTTCTCCTCTGAGTTTCCCCATTACTCGTCCAATGCTCTATCGCTCGAGCTACTCCAGTCCATTTCGCACTCCCTAAACGATGCCGTTTCGCTTGCCAAAGAATGTCAGTCCCCCAACTTATCCCAGGGGAAGCTTAAGACTCAGAGCGACATTGATTCAGTCCTCGCTAAGCTGGATCGCCATGTTAAAGACTGCGAGATTCTGTTCAGGAGTGGGGTTTTGCAAGACGCGGCCGTTTCTAGCGTGTCTAATAGAGAGGCCATACGTTCTGAATCCAGGAACTTGATTACTCGGCTGCAAATCGGTTCTGCAGAGTCCAGGAAGTCAGCGATGGACTCCTTGTTGGGTTTACTCGAAGAGGATGATAAGAATGTGATGATAGCTGTGGCGCAGGGTGTGGTTCCAGTGCTTGTCCGTTTACTGGATTCTGCCTCTCCCGAGATGAAGGAGAAGACTGTTGCTGCCATCTCCAGAGTCTCCATGGTAGATAGTAGCAAGCATGTTTTGATCGCTGAGGGTTTGTTGCTTTTGAATCAATTGGTCCGAGTTCTGGATTCGGGGAGTGGATTTGCCAAACAGAAATCATGCATAGCTCTCCAGGCTCTAAGTTTCTCCAAAGAGAATGCTAGAGCAATTGGGTCTAGAGGTGGAATCTCGTCACTATTAGAGATTTGTCAATCCGGCACTCCTGGTTCCCAAGCTTCGGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTCCCTGAAATTAGAGAGACTTTTATCGAGGAAAACACCATTGATGTTCTATTGGGGCTCGCCTCATCGGGAACTGCGTTGGCGCAAGAAAATGCACTTGGGTGTTTGTCCAATTTAGTTTCTGAGGACGAAAGTTTAAAAATTTTATTTGTGAAGGAAGGAGGGATCGAGTGCCTGAAGAATTTTTGGGACTCAGCTCCGACAGCTCGGAGTCTGGAAGTCGCAGCTGAGTTGTTGAGTCATCTGGCTTCTAGTTCACCGATTGCTGACGTCCTTGTTTCTGATGGGTTTATACTCCGCCTTGTGGGTGTGTTGAATTGTGGAATTCTAGGGGTGAGAACTGCGGCCGCTCGAGCTGTTTATGCTTTGGGGTTGTACAACACAAAATCGAGGAAGGAGATTGGTGAATGTGGATGTATGACCCCATTGATCAAGATGCTGGATGGCAAAGCTATAGAAGAGAAAGAAGCAGCCGCGAAAGCGTTGTCGGTGCTCATGTTGTATGCGGCCAATAGAAAAATTTTCCGGAAGGACGAGAGGGGTATAGTTAGTGCTGTTCAGCTGTTGGATCCTTCAATACAGAATTTGGATAAAAAATATCCTGTTTCAGTGCTGACCTCGCTTGTGCGTTCAAAGAAATGTAGGAAACATATGGTGTCGGCCGGTGCTTGTGTATATACGCAGAAACTTGTTGAGATGGATGTTGAGGGTGCCAAGAAACTGTTGGATAGCCTTGGTAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.4662 MKESENDIVNVSIRLLSSLLDEIPTVVNFKGKWSLIRAKLFDLQTQLTDFSSEFPHYSSNALSLELLQSISHSLNDAVSLAKECQSPNLSQGKLKTQSDIDSVLAKLDRHVKDCEILFRSGVLQDAAVSSVSNREAIRSESRNLITRLQIGSAESRKSAMDSLLGLLEEDDKNVMIAVAQGVVPVLVRLLDSASPEMKEKTVAAISRVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCIALQALSFSKENARAIGSRGGISSLLEICQSGTPGSQASAAGVLRNLSVFPEIRETFIEENTIDVLLGLASSGTALAQENALGCLSNLVSEDESLKILFVKEGGIECLKNFWDSAPTARSLEVAAELLSHLASSSPIADVLVSDGFILRLVGVLNCGILGVRTAAARAVYALGLYNTKSRKEIGECGCMTPLIKMLDGKAIEEKEAAAKALSVLMLYAANRKIFRKDERGIVSAVQLLDPSIQNLDKKYPVSVLTSLVRSKKCRKHMVSAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1589 551 Gene3D - 358 531 IPR011989 -
Lele24g1589 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Lele24g1589 551 SUPERFAMILY ARM repeat 143 489 IPR016024 -
Lele24g1589 551 Gene3D - 131 357 IPR011989 -
Lele24g1589 551 SMART arm_5 254 294 IPR000225 GO:0005515
Lele24g1589 551 SMART arm_5 421 461 IPR000225 GO:0005515
Lele24g1589 551 SMART arm_5 295 335 IPR000225 GO:0005515
Lele24g1589 551 SMART arm_5 170 210 IPR000225 GO:0005515
Lele24g1589 551 SMART arm_5 379 419 IPR000225 GO:0005515
Lele24g1589 551 SMART arm_5 337 378 IPR000225 GO:0005515
Lele24g1589 551 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Lele24g1589 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1589 Lele-ChrLele24 21578535 21580190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1589 53 410 U-box Gene Family AT2G23140 26.503 2.95e-16 80.1