Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1583 ATGGCAAAACAGCAAAACATCGACCCTGCCATCATCAACCCTCTTCGCCATCAGGGCAAAGACGAAGATAGGGAATTGCAACTTGGATCCGACGAGCCTGAGGCCCCATTGCCTCTCACTGCTACTTCCCGGGTCTTGTATATGTTGGGAGATATCGCGGCAGGGCCTGCGTTTAGGTTTACGCAATGGCTCGAATCGGTTCGTAAACGCACTGCCAGAAATCGCCACTCCGGGTTCCCCCACCGCCTTACGAGGCTTCCCGATGCTACTATGCCTTCTAGTCCAGAAGGATCAATGGACTATCCAAAATGCGATTCACCTCCTGTGCAAACAACAGAACTTAGTTTGTGGGAAAGGCTTGGTAATGCTGCTATGTTGGACATTGAATCTAGTTCTTTTTCTTGGGAGAGGCTATCTTCACTGCATCACACTGAACACAGCAGCAGCACCGAACATTCCGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGGGGAGTTGTCTTCTTTGCCTTCTTTAATGGGAGTGATGATACTTCTCCAAAGGAGGAAGCTGCTGTAATAAAAATATCATCATCAAGAATGGCAACACAATCTGAACGCCTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGCTAGAGTTATTCACAATACCAGTCCAGAGTGGCTCCAAATAAAGGAAGCTGCAGAAAAAGCTAGAAATAGAGCATTTTCTGAAGGAGATCAAACTGTTGAAATGACTTGTTTAGAACTTTTGGAAGCACTAGAGCTTAGTAGGTGCCTCTTTTTTATGAGTTATATACATGGATCGCCTTTACTAGAAAGTTCAACAAAGCTACGTGACTTCCATAAATATGCAAAGGTTGATGCAGAATCTAATAAAGAATTAGAACAGTGGAATGAAACACTTAAAAGTGATGCTATCAAGCTATGCCAGGACAACAATTTCAATACTGGATTTTTTGAGTGCAGTGATAATAACAGTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCACATTCTTGAAAGGATTGCATTAATCTCTGAGGCTGCAAATACAGAGAAGCCATCTGCTGTTACAAATAGTCTATTCATTGGTGGAGCACTGGCTGCAAGATCTATATACACACTGCAACACTTGGGCATCACGCATATTCTGTGTTTGTGCACCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTATAAAAATTTCTATGTTTGTGACTATGTAGATTGTAACATCAGCAGCATATTTGAAGAAGCCTGTGATTTTATAGATCATGTTGAACAGAAAGGCCAGAGAATTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGCGTCACGTTGGTCCTTGCTTACTTGATGCTTAGAAAGAAGTTCACTTTATTAAAAGCATGGAATACTCTTAAACGAGCTCATCGTCGAGCACAACCCAACGACGGCTTTGCAAAAATCTTACAGGAACTAGATAAGAAACTTCATGGAAAGGTTTCCATGGAGTGGCAGCAAAGGAAGCCAATGATGAAGGTTTGTCCAATGTGTGGAAAAAATGCAGGACTAAGCAGCAGCTCACTTAAGCTTCATCTGCAGAAATCCCACAAAAAGCTATCATCAGGGAGTGTGGACAGTGCCATGACAATGGAAATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGTGGGAGTGTCAGCCCCACGCAAAGGCAGCCTAGTTCAATAGTGGATGAGTGA 1779 0.4266 MAKQQNIDPAIINPLRHQGKDEDRELQLGSDEPEAPLPLTATSRVLYMLGDIAAGPAFRFTQWLESVRKRTARNRHSGFPHRLTRLPDATMPSSPEGSMDYPKCDSPPVQTTELSLWERLGNAAMLDIESSSFSWERLSSLHHTEHSSSTEHSEDEMNKALEVTVNSGGVVFFAFFNGSDDTSPKEEAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSPEWLQIKEAAEKARNRAFSEGDQTVEMTCLELLEALELSRCLFFMSYIHGSPLLESSTKLRDFHKYAKVDAESNKELEQWNETLKSDAIKLCQDNNFNTGFFECSDNNSVVDAYELKVRLEHILERIALISEAANTEKPSAVTNSLFIGGALAARSIYTLQHLGITHILCLCTNEIGQSDSQFPDLFEYKNFYVCDYVDCNISSIFEEACDFIDHVEQKGQRILVHCFEGRSRSVTLVLAYLMLRKKFTLLKAWNTLKRAHRRAQPNDGFAKILQELDKKLHGKVSMEWQQRKPMMKVCPMCGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQPSSIVDE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1583 592 MobiDBLite consensus disorder prediction 1 35 - -
Lele24g1583 592 MobiDBLite consensus disorder prediction 76 107 - -
Lele24g1583 592 SMART dsp_5 365 507 IPR020422 GO:0006470|GO:0008138
Lele24g1583 592 Pfam Actin-fragmin kinase, catalytic 113 284 IPR015275 -
Lele24g1583 592 MobiDBLite consensus disorder prediction 15 30 - -
Lele24g1583 592 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 285 590 IPR035010 GO:0004721|GO:0009737|GO:0043622
Lele24g1583 592 SMART ptp_7 415 528 IPR003595 -
Lele24g1583 592 ProSiteProfiles Dual specificity protein phosphatase domain profile. 365 510 IPR020422 GO:0006470|GO:0008138
Lele24g1583 592 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 365 510 IPR029021 -
Lele24g1583 592 Pfam Dual specificity phosphatase, catalytic domain 380 505 IPR000340 GO:0008138|GO:0016311
Lele24g1583 592 FunFam Dual specificity protein phosphatase PHS1 337 511 - -
Lele24g1583 592 SUPERFAMILY Protein kinase-like (PK-like) 63 298 IPR011009 -
Lele24g1583 592 CDD DSP 366 503 - -
Lele24g1583 592 Gene3D Protein tyrosine phosphatase superfamily 347 520 IPR029021 -
Lele24g1583 592 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 434 486 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1583 Lele-ChrLele24 21503723 21511633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1583 284 576 Protein tyrosine phosphatase (PTP) family AT5G23720 78.157 4.05e-157 472