Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1581 ATGCTTTGCTCGTCGCTATCGTTTGATAATATTAAGTTGCAAAAAGCCAACGGCCTTTTCCTTCTGCAATGTCCTCTTCCATTAAACTCTCTTTCTCCTTCTCTTAACTTCAGCTACTCACCGCATTTTGCTTCTTCTTCTTCTTCTTTTCCCCGAACAAAAAGCCAGAAACTTCAGTCAATGAAGAATTTCATAATGATTTCTGGAGTAAGCGGCGTCGCTTGGATGGACGAAAACAGAGAAGGAGACGACCCTACTGCTCCTTCTTCATGGGCTAACTTGAACGCCAACATCAACATCGACAAAAACCAAAACCAGAGCCATTCTGGTTTTGTCCAGAAAAAGGACGAGATGGGTGCTCTGTGTGCTCTCAAACCCATGCTTGAAATCGATGACGACGATTGCTACCTGGCGAACAATGGTATCCAAAATCAATCAGATATTATCAGAGACATCGCTTTCTCTCCCAACTTTGCTGACCAAGATGGTTTATTGCTGAACCCAGTGGATTCGTCCCATTCATGTTCCCCATCTACCACCGTCTTCAACAATCTCGACCCATCTCAGGTTCCGTATTTTCTTCCTCGGAAACCCACCTTATCGTCTCTTCTTAATGCCGTCCATAGTAACAATCCTTTAGACCATGGTTTTGATGTGGGTTGCGATGTCGGGTTTCTTGAGCTTCAAGCTTCCGGCTCTAGCCTTCTGCGAGGCTTCGCCGATTTCAGCTCACATAACAACCAGATAAGCCTTCCTAATTTATGCTCAGCCCCACAAGTTCCAACGTCAGGTATACCGCAGGTAACCGAAAGCAGTTTTTCGGGTTTCCGGGGTTTCGAGGAAGGTCCTGGAAAACCGCTTTTTCTAAATAGACCGATCTTGAGACCCCTCGATTCATTACCTCCATCGGGAGCTCAGCCCACTCTTTTTCAGAAGAGAGTGGCTTTCCGAAAGAAGCTAGCCAGTAACGGGACTGAGAGAGACGGAGGAAAGGATGAAATCGGAGAGGGGATCGAGAAGAAGAGGAAGATGGGTAGTTGGGAAGAAGTGGAAGACGCTAGCTTTGATGGGTCGGGGCTGAACTACGATTCCGACGAGTTGACTGAGAATACGAGGGCGGAAGAGAACGGCAAGATCGGGGGAAACAGCTTTAATGTAAACAGTGCGGTGACTGGTGGTGGTGACGGTGGCGATAAGAAGGGGAAGAAGAAGGGAATGCCTGCGAAGAATTTGATGGCTGAACGACGTCGTCGGAAGAAGCTCAATGATAGACTCTATATGTTGAGGTCCGTTGTTCCAAAGATTAGCAAGTTGATACTCTGCTTACATACAGAAGATGGGCATCACGATCTTTCAATTATTTTGTACTTCTCTTTGATCTTGGTTTGCAGGACTGCTAATGAAGCTGCTGATTTAGTTCAAGATAATTGTAACATAATGGACAGGGCTTCAATTCTTGGAGATGCAATTGACTACCTTAAAGAACTTATACAAAAGATCAATGACCTCAATGTTGAATTGGAGTCAAATTCTTCTGGTTCTTCACTGAGTACTCCGGCCCCCAGCTTTCATCCTCTGACACCGACTCTGCCAACGTTGCCCAGCCATATAAAGGATGAACTTTGCCCCAGCTCATTGCCGAGCCCTAATGGCCAACCTGCAAGGGTAAAGTATCGTCTATTCTGA 1686 0.4597 MLCSSLSFDNIKLQKANGLFLLQCPLPLNSLSPSLNFSYSPHFASSSSSFPRTKSQKLQSMKNFIMISGVSGVAWMDENREGDDPTAPSSWANLNANINIDKNQNQSHSGFVQKKDEMGALCALKPMLEIDDDDCYLANNGIQNQSDIIRDIAFSPNFADQDGLLLNPVDSSHSCSPSTTVFNNLDPSQVPYFLPRKPTLSSLLNAVHSNNPLDHGFDVGCDVGFLELQASGSSLLRGFADFSSHNNQISLPNLCSAPQVPTSGIPQVTESSFSGFRGFEEGPGKPLFLNRPILRPLDSLPPSGAQPTLFQKRVAFRKKLASNGTERDGGKDEIGEGIEKKRKMGSWEEVEDASFDGSGLNYDSDELTENTRAEENGKIGGNSFNVNSAVTGGGDGGDKKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKLILCLHTEDGHHDLSIILYFSLILVCRTANEAADLVQDNCNIMDRASILGDAIDYLKELIQKINDLNVELESNSSGSSLSTPAPSFHPLTPTLPTLPSHIKDELCPSSLPSPNGQPARVKYRLF 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1581 561 MobiDBLite consensus disorder prediction 321 407 - -
Lele24g1581 561 Gene3D - 399 512 IPR036638 GO:0046983
Lele24g1581 561 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 405 496 IPR011598 GO:0046983
Lele24g1581 561 MobiDBLite consensus disorder prediction 321 350 - -
Lele24g1581 561 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 408 517 IPR036638 GO:0046983
Lele24g1581 561 MobiDBLite consensus disorder prediction 375 390 - -
Lele24g1581 561 Pfam Helix-loop-helix DNA-binding domain 412 496 IPR011598 GO:0046983
Lele24g1581 561 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 278 551 - -
Lele24g1581 561 Coils Coil 490 510 - -
Lele24g1581 561 SMART finulus 411 502 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1581 Lele-ChrLele24 21486667 21488818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1581 124 560 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 40.741 1.40e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele24g1581 HLH 3.8e-07 No_clan