Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1580 ATGTTTTGTGGTCGCAAGCCGGGACTCTTGCTTACAACCATGAAGGCTTTGGACAACCTCGGATTAGAGATCCATCAAGCTGTTATTAGCTGTTTTAATGGATTTGCCATGGATGTCTTTCGAGCTGAGCTAACCTTCACTTTGTTTCAGCAATGGAAGGAAGGTCAAGATGTTGTTCTTCCAGAGCAAATCAAAGCAGTACTGTTGGAGTCAGCTGGCTACCATGTCGCGAACTAG 237 0.4515 MFCGRKPGLLLTTMKALDNLGLEIHQAVISCFNGFAMDVFRAELTFTLFQQWKEGQDVVLPEQIKAVLLESAGYHVAN 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1580 78 CDD ACT_UUR-ACR-like 2 40 - -
Lele24g1580 78 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1580 Lele-ChrLele24 21483946 21484352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1580 1 46 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 82.609 1.49e-23 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1637 21 24348680 24352969 Lele24g1580 24 21483946 21484352 hybridization
Lele22g1620 22 21740820 21745513 Lele24g1580 24 21483946 21484352 hybridization