Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1577 ATGTCCCACTTCACCCAACAAATAAAGAAGGCCTGTGCCCTGTGGTTTTATGTGATTCTGAGGCCTTTCATTACATTTATCAAATTATTGCAATTCAAATCCCAAAATAGAAAAATCTGCCTTTTGTTTGCTGCTAAATATGAAGTTACCGTCCAAAAAAGGAATGATACCCGTTTGTTGCACACTTTGCGAGAGTTCTTAGGTGAGAATAAATACATGTACGTTGGAATGATAAAAAAAGAGAGAAGTGTAGAAAGAAAAATAGCGGGTGAGAGGTTTCGTATTTCGAGCGACAAGCATGAAAAATCGCGACAGAGAGCGATTCCTTCCCCTTCCAAAGTACCAGGATCAACACCAAGCGTATTGATTATTCACCATCTTTTATTCTGGACAATGCAAATTGATAATCTTGATGATTCGCCCTTGTTCCGCCAACAGATCCAAAACTTGGAAGAAGGTACTGACTTATTAAGATCCAGATGCTGGAAGTTCTACAAAGGATGTCGAAAGTACACGGAGGGGCTTGAAGGGGAATATGATGGGGACAACGCGTTTGCAAATGCCCTTGAAACATTTGGAGGAGGGCCTAGTGATCCTCTTTTTGATGTTGTGGGAGGTAGGCCTTATTGTTTTCCTTTCTCCATCTGCCTTTTCTGTAAAGGATCTGTAATGACGAAATTCACTGTTGCTTTGAGAGAAATCAGTACATACAAGGAGCTGCTTCGGTCACAGGTGGAGCACATGCTGAATGACCGATTACTACAAGTTCTCAATGTTGACATCCTTGATGCCAAGGAAGCTCGAAAACGTTTTGATAAAGCCTCCGTTCAGTATGAACAGAAAAGACCGTGTAAATGTAAGCACGAGCAATTATTATCTCCTGATCATAGTAGCCATGCACTGGGTTTCGTGGTACAGGCACGTGATAAATTTACGTCTTTGAGGAAAAGCGCCAAGTTGGATACCGTCGCTGCCGTAGAAGAGGAAATGCACAATGCAAGGGACTCATTTGAGGAAGCCCGTTTCAACCTGGTTAGTGCTCTCAACCATATTGAGGCCAAGAAGAGATTTGAGTTTTTGGAGGCTGTTCCTGGAATTATGGATGCTCATCTTCGATATTTTCAACAGGGATATCAACTATTCCAGCAGATGGAACCTTTCATCAGCGAGGAACACTTCTATATATTTAATTCTGCTAGGTTGCAGGTTCTGAGTATTGCACAAAAGTCGAGAGAAAATTACAATACGGAGCAGATTTCCCTTCTTGAAAGAATTCAAGAGTACAAAAAACAAATTCATCAAGATAGTAAGCTCAACTCGAATGGCCCTTCTCCTAATAGAGACATGCAAGCTTTTGCTAGGATACCTAATGATGTGGCCGATGCTGTAATGGAATCTGCTGCAAATGGAAAGGTTCAAATTCTTAGACAAGGATATCTATCAAAGCGATCTTCCAATCTGAGAGGGGCATGGAAGAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGTTATACTACCATCGCAAACCGGGCAACTGGTTGCAAGCGCACGGCGGCGGCCAACAATCCGCAGCAAAGAATAATCCCACTGAACCTGGTACTGGGCTTTTGAGCCGTCTTGCTTATCACCATGCTGTTGTCGATGAAAAAACTGCCGCACGTCGTGCAGTGAACTTGCTAACATCAACAATCAAGATTGATGCTGAGCAGACGGATTTAAGATTTTGCTTCAGAATTATTTCACCAACAAAGAACTTCACACTGCAAGCAGAAAATACGCCGGACCAAATGGATTGGGTTGAAAAGATAACAGGAGTAATTGCCTCCTTGTTGAATGCCCAAACAATAGAAATGCCTCCCTCAGTTGACTCTGAATGCAATGATGGTAACCCAGCCAGTAAGACTAATACGTCGGAAAATCCTCCAGTTGATGATCAGGTTGTAAAAAGTGAAAAGCCGATTGAAGTTCTTAGAAAGGTGTGCGGGAATGACAAGTGCGCTGATTGTGGTAAACCTGATCCGGACTGGGCATCCTTAAACCTCGGTATTCTTATATGCATAGAATGTTCTGGTGTGCATCGTAATCTTGGTGTACATATATCTAAAGTAAGATCGTTGACACTGGATGTGAAAGTCTGGGACGCTTATGTTTTGGGCATGTTTCAGTCACTGGGTAATCTCTTTGCAAACTCAATTTGGGAAGAGCTGTTGCGTTCACCAAATAATTCGCAATCAGATGATATGCCTGTATCTTCATTTAAGGCCAAAACTAAATTATTTCATTCAAAGAAACCAGAACATGATGACCCTATTTCATTTAAGGAGAGGTTCATTCACGCAAAGTATTTGGAGAAGGTCTTTGTTAACCGGAAGAAGAAGAAAACCGAACGTATCCGATCCCTGGCTCACCAGGTGTGGGAAAGCATCTGTGCCAACGACAAGAGAGGAGTGTACCGACATATAGTCAAGTCAGATGTGAATCTCAATACCATCTCTGAGCGAGTATCATATGGTGTGTATGCTTCTTGTCTCTCAACTCCATTAACAGGTAATTCTGAGGTGCCGTCTTCAAGTAATATAGACTACTCATCCAAAAACAATATAGACTCGTCAACAAAAAAAGAAAATCAGCCGACAGAGTTGCGACCCAAAAAAACAGAAAATGAGCTGGTAGAGGATAGACAAGATTGTTCTAGTTCGAGTGTGCTTCATCAGGCATGTCTAACTGCCGATTCAAGCATGGTGGAGCTCCTTCTCCAGTATGGTGCGGATATAAATGCTCCAGATTCAAGAGGTCAGACACCACTGCATTGTTGTATAATCAATAGCAAGAGCGCAGCTGCAAAACTGCTTGTAATAAGAGGGGCCAATTCTCACGCTGCAGATAAAGAAGGCAATACCCCTATTGAGCTTGCTTCGAGATCCGATTCTATTGGAAGCGATGTTTTCTCTCTCTTAACAAGCAGATAG 2970 0.4215 MSHFTQQIKKACALWFYVILRPFITFIKLLQFKSQNRKICLLFAAKYEVTVQKRNDTRLLHTLREFLGENKYMYVGMIKKERSVERKIAGERFRISSDKHEKSRQRAIPSPSKVPGSTPSVLIIHHLLFWTMQIDNLDDSPLFRQQIQNLEEGTDLLRSRCWKFYKGCRKYTEGLEGEYDGDNAFANALETFGGGPSDPLFDVVGGRPYCFPFSICLFCKGSVMTKFTVALREISTYKELLRSQVEHMLNDRLLQVLNVDILDAKEARKRFDKASVQYEQKRPCKCKHEQLLSPDHSSHALGFVVQARDKFTSLRKSAKLDTVAAVEEEMHNARDSFEEARFNLVSALNHIEAKKRFEFLEAVPGIMDAHLRYFQQGYQLFQQMEPFISEEHFYIFNSARLQVLSIAQKSRENYNTEQISLLERIQEYKKQIHQDSKLNSNGPSPNRDMQAFARIPNDVADAVMESAANGKVQILRQGYLSKRSSNLRGAWKRRYFVLDSRGMLYYHRKPGNWLQAHGGGQQSAAKNNPTEPGTGLLSRLAYHHAVVDEKTAARRAVNLLTSTIKIDAEQTDLRFCFRIISPTKNFTLQAENTPDQMDWVEKITGVIASLLNAQTIEMPPSVDSECNDGNPASKTNTSENPPVDDQVVKSEKPIEVLRKVCGNDKCADCGKPDPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDAYVLGMFQSLGNLFANSIWEELLRSPNNSQSDDMPVSSFKAKTKLFHSKKPEHDDPISFKERFIHAKYLEKVFVNRKKKKTERIRSLAHQVWESICANDKRGVYRHIVKSDVNLNTISERVSYGVYASCLSTPLTGNSEVPSSSNIDYSSKNNIDSSTKKENQPTELRPKKTENELVEDRQDCSSSSVLHQACLTADSSMVELLLQYGADINAPDSRGQTPLHCCIINSKSAAAKLLVIRGANSHAADKEGNTPIELASRSDSIGSDVFSLLTSR 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1577 989 Pfam Ankyrin repeats (3 copies) 903 986 IPR002110 GO:0005515
Lele24g1577 989 SMART ANK_2a 931 960 IPR002110 GO:0005515
Lele24g1577 989 SMART ANK_2a 898 927 IPR002110 GO:0005515
Lele24g1577 989 Pfam Putative GTPase activating protein for Arf 653 790 IPR001164 GO:0005096
Lele24g1577 989 PANTHER CENTAURIN/ARF 135 987 IPR045258 GO:0005096
Lele24g1577 989 MobiDBLite consensus disorder prediction 875 893 - -
Lele24g1577 989 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 633 797 - -
Lele24g1577 989 PRINTS HIV Rev interacting protein signature 682 699 IPR001164 GO:0005096
Lele24g1577 989 PRINTS HIV Rev interacting protein signature 663 682 IPR001164 GO:0005096
Lele24g1577 989 MobiDBLite consensus disorder prediction 849 874 - -
Lele24g1577 989 MobiDBLite consensus disorder prediction 619 644 - -
Lele24g1577 989 SUPERFAMILY BAR/IMD domain-like 135 496 IPR027267 -
Lele24g1577 989 Gene3D - 466 620 IPR011993 -
Lele24g1577 989 ProSiteProfiles Ankyrin repeat profile. 931 963 IPR002110 GO:0005515
Lele24g1577 989 Coils Coil 323 343 - -
Lele24g1577 989 Pfam BAR domain of APPL family 306 390 - -
Lele24g1577 989 Pfam BAR domain of APPL family 135 280 - -
Lele24g1577 989 CDD BAR_SFC_plant 146 387 IPR035670 -
Lele24g1577 989 ProSiteProfiles ARF GTPase-activating proteins domain profile. 651 795 IPR001164 GO:0005096
Lele24g1577 989 Coils Coil 411 431 - -
Lele24g1577 989 SMART 5bar 136 390 IPR004148 GO:0005515|GO:0005737
Lele24g1577 989 Gene3D - 867 979 IPR036770 -
Lele24g1577 989 MobiDBLite consensus disorder prediction 619 645 - -
Lele24g1577 989 CDD PH_ACAP 476 612 - -
Lele24g1577 989 CDD ArfGap 654 782 - -
Lele24g1577 989 Gene3D Arf GTPase activating protein 632 797 IPR038508 -
Lele24g1577 989 ProSiteProfiles Ankyrin repeat profile. 898 930 IPR002110 GO:0005515
Lele24g1577 989 MobiDBLite consensus disorder prediction 849 893 - -
Lele24g1577 989 Pfam PH domain 475 607 IPR001849 -
Lele24g1577 989 ProSiteProfiles Ankyrin repeat region circular profile. 898 929 - -
Lele24g1577 989 SMART arf_gap_3 651 795 IPR001164 GO:0005096
Lele24g1577 989 ProSiteProfiles PH domain profile. 473 608 IPR001849 -
Lele24g1577 989 SUPERFAMILY Ankyrin repeat 894 978 IPR036770 -
Lele24g1577 989 ProSiteProfiles Ankyrin repeat region circular profile. 931 963 - -
Lele24g1577 989 Gene3D Arfaptin homology (AH) domain/BAR domain 304 434 IPR027267 -
Lele24g1577 989 Gene3D Arfaptin homology (AH) domain/BAR domain 134 298 IPR027267 -
Lele24g1577 989 SUPERFAMILY PH domain-like 474 625 - -
Lele24g1577 989 SUPERFAMILY ArfGap/RecO-like zinc finger 651 790 IPR037278 -
Lele24g1577 989 SMART PH_update 474 610 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1577 Lele-ChrLele24 21434165 21445703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1577 663 801 C2H2 Transcription Factor Family AT4G21160 41.429 5.68e-20 90.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1616 22 21680501 21692770 Lele24g1577 24 21434165 21445703 hybridization