Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1573 ATGATTTCCCCCTTTATTGTCAGTCTTCATCTTATTTCTGCTCACCCTGTTTGTGATCCTGTTGCTAACGCATGCAGAGATTCAATGCCTGAAATGGAAAAGGCCCTGAACAACCAGGAAGAACTTTCTGGCTTTATATGCATGTGTAATCATGTAACAGAGGCAGAATGCTACCGATTCCGAGTTTTTGGGCTCCCTGGATGGAGAAAGGAAGTTGTAGAGAAAATACAGCCTGGCACGTACCTTTTCTTTTTTGATTATGATTTAAAGCTTCTCTATGCATGGCCTCTTGCTGCGCAGAATACTTATTCAGCTGGGAATAGCGGTGGTTTTGGTGAATCAGTGCCAGAACCTCAAGCAGTCAAGCTCCATCAATATCAGATCCAGTATGTGCACCATAATGTTCTAAATCCACAACCAAATTTTAATCCCTACTTGAATGCGGGCTATGTTGATCCTATTGTGCAGCCACATGCTTCGTCATCATCAAATATTCCATATCATTCTGGTCAAATTGGGGACAAATACATTCCTGAAGCTGTCATCTCCGCCTCTTATCCTCATGAAGGTTGCAGTGTAGTTGCTATTACGAGGTCTGGAGCGGTTGAAGGAATAATGCATGGTGATCAACAGACTGGGGCAAATCGAAGTTGCTTTTCAGAGAGTGATGGAAACAAAAGCAGCTATATGGTGTATTGTAACAAGAACTGTGGTAACCAGAAGTGCTCAGTCACCCTCCTGCTGAAGCCAGCCAACACCTACGCTGAATTCCAATGGGCAACTACTTCTCCGACGTTGGGCACCGCCGGCTCTCTCCTCAATCCTGCTGATTCTCCAAACGATGCTGTTGATAACTTCCTAAAGTATCGTGGCTATCATGGCCTCTACTCTCAGACCGAGGTTCTTTTTCTGTTTTGGAACAAGTTTCTCAGGACATTTCGCTCTCTTCCTGAGTTAGAATTTCAATTCGTGACTAGTTTTTATGGAAGGACTTTTTTTAAGCATGCCAGTGGCTTCTTTTGTGCTGCAGTTATCTTTTTCTGCTTCAGTGGAGCACTTGAGGAACTGGGCCGCACAGAAGTAGTCCTAAATTCTTTGAATCCCTCATGGATCACTAAGCACACTCTTTTATATCATTTCGAGGTTGCTCAGATGCTTAAGCTAGAAGAGGAGCAATATCTTGGTGAAGCAACCTGTGCGTTATCTGAGTTGGAAAAGCTTCATTCTGGTGGTCAAGGAGAAAGTTTATTTTTGTCCACTGCTGATGGAAAAGATAATCATGATGAGGTTTTGGATGCAGAGAAGGAAGAGAGGCTTGAAAGTTTTTCGGGTCGGGTTGCTTCACGGGATATAGTCCAGTTTGTTCCATTCCGGGATTTTCAAAGTAGATGGACAGATCATAATTTAGAATCAGGTAAAGTGGATCGAAATCATGGAAAGAGATCAGGTTCTTCCGAAGAAGCGAAAGAGAAAGAAGAAGAAGAAGAGTTAATGTTCCCAATCTACTCTGATCGTGCTCAGCAAGATATGTCCGCCATGGTTTCTGCTCTTGCTCAGGTGATTGGGGCTTCTCCTAATGTTTATGATCAGAACCATTTAACTGATCATATATCTCAGTCCACTTCTGAAACTAACTCTCAGCAATGTCTTCAAACACTTCAACATCATCAAGGGAGCACAAGGAAGAGACACTACAGAGGAGTAAGGCAAAGGCCATGGGGGAAGTGGGCGGCTGAGATTCGTGATCCCAAGAAAGCCGCCAGAGTTTGGCTCGGAACCTTCGACACGGCTGAGGCGGCCGCCCTTGCTTACGACAAAGCCGCTCTCAAATTCAAAGGAAGCAAAGCTAAGCTCAACTTCCCTGAAAGAGTTCAACTTCAGCCCCCACCTTCCATGACGACGACCACGACGTCGTTTCCTTCTTCTTCAGGTGAATTTTCTTTCCTCATAAACCCTCCTCATAATCCACAACCGCCACTTGTTCTTGCTCCTCCGACGATACCGTTCTTTTCACAACAACCTTATCATTATAATTACCAATATAATCCACATCTTCTGGGAAGTGTTGGTGGCGGCGGTCACAATTTGTTTAATTATTCTACACAACAACAACTACAACCTTATACGTCTGTGTCTTCGTCCTCGTCTTCCTCGGATGGAATGTCTCACCAGCAGCATGAACAAGAACGAGAACAACTTCTACAGTTTCCCATAATGCAATTTGGAGCTCCCTCTTCTTCTACTTCTCATCCTCCTTCAACTTGGCCATATCATGAGTTTGATGGTCAACGTTGA 2295 0.441 MISPFIVSLHLISAHPVCDPVANACRDSMPEMEKALNNQEELSGFICMCNHVTEAECYRFRVFGLPGWRKEVVEKIQPGTYLFFFDYDLKLLYAWPLAAQNTYSAGNSGGFGESVPEPQAVKLHQYQIQYVHHNVLNPQPNFNPYLNAGYVDPIVQPHASSSSNIPYHSGQIGDKYIPEAVISASYPHEGCSVVAITRSGAVEGIMHGDQQTGANRSCFSESDGNKSSYMVYCNKNCGNQKCSVTLLLKPANTYAEFQWATTSPTLGTAGSLLNPADSPNDAVDNFLKYRGYHGLYSQTEVLFLFWNKFLRTFRSLPELEFQFVTSFYGRTFFKHASGFFCAAVIFFCFSGALEELGRTEVVLNSLNPSWITKHTLLYHFEVAQMLKLEEEQYLGEATCALSELEKLHSGGQGESLFLSTADGKDNHDEVLDAEKEERLESFSGRVASRDIVQFVPFRDFQSRWTDHNLESGKVDRNHGKRSGSSEEAKEKEEEEELMFPIYSDRAQQDMSAMVSALAQVIGASPNVYDQNHLTDHISQSTSETNSQQCLQTLQHHQGSTRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDKAALKFKGSKAKLNFPERVQLQPPPSMTTTTTSFPSSSGEFSFLINPPHNPQPPLVLAPPTIPFFSQQPYHYNYQYNPHLLGSVGGGGHNLFNYSTQQQLQPYTSVSSSSSSSDGMSHQQHEQEREQLLQFPIMQFGAPSSSTSHPPSTWPYHEFDGQR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1573 764 CDD AP2 564 622 IPR001471 GO:0003700|GO:0006355
Lele24g1573 764 ProSiteProfiles AP2/ERF domain profile. 564 621 IPR001471 GO:0003700|GO:0006355
Lele24g1573 764 MobiDBLite consensus disorder prediction 626 644 - -
Lele24g1573 764 ProSiteProfiles DCD domain profile. 40 178 IPR013989 -
Lele24g1573 764 Pfam Development and cell death domain 44 111 IPR013989 -
Lele24g1573 764 Gene3D AP2/ERF domain 563 623 IPR036955 GO:0003700|GO:0006355
Lele24g1573 764 MobiDBLite consensus disorder prediction 707 764 - -
Lele24g1573 764 MobiDBLite consensus disorder prediction 739 754 - -
Lele24g1573 764 PRINTS Ethylene responsive element binding protein signature 565 576 IPR001471 GO:0003700|GO:0006355
Lele24g1573 764 PRINTS Ethylene responsive element binding protein signature 587 603 IPR001471 GO:0003700|GO:0006355
Lele24g1573 764 PANTHER DNA-BINDING DOMAIN 509 721 IPR044808 GO:0003700|GO:0009873
Lele24g1573 764 MobiDBLite consensus disorder prediction 707 722 - -
Lele24g1573 764 SUPERFAMILY DNA-binding domain 564 622 IPR016177 GO:0003677
Lele24g1573 764 Pfam AP2 domain 564 613 IPR001471 GO:0003700|GO:0006355
Lele24g1573 764 MobiDBLite consensus disorder prediction 537 556 - -
Lele24g1573 764 SMART rav1_2 564 627 IPR001471 GO:0003700|GO:0006355
Lele24g1573 764 MobiDBLite consensus disorder prediction 537 568 - -
Lele24g1573 764 MobiDBLite consensus disorder prediction 625 644 - -
Lele24g1573 764 MobiDBLite consensus disorder prediction 470 495 - -
Lele24g1573 764 SMART dcd 40 129 IPR013989 -
Lele24g1573 764 FunFam Ethylene-responsive transcription factor 2 563 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1573 Lele-ChrLele24 21388530 21402927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1573 498 626 AP2-EREBP Transcription Factor Family AT5G61890 63.359 6.18e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g1573 Dev_Cell_Death 6.8e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1629 21 24247136 24252451 Lele24g1573 24 21388530 21402927 hybridization