Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1572 ATGGATCCCGAAGCATTCACCGCCAGCATCTTCAAGTGGGACCCACGCACCATCCTCTCAACTTCCGCGCTTAACCGCCCCCCGCTTCCCGAGTACACCATGGCTCCACCGGCGCCTCCATCGGCCGCCGCCTTTGTGAGGGGTTCCAGCAGGGAGGTGGGAGGGCTGGATGAGTTGTTCCAGGCTTATGGGATTAGGTACTACACGGCGGATAAGATAGCTGAGCTTGGGTTCACGGTGAGCACTCTCGTCAACATGAAGGACGATGAGCTTGACGAGATGATGAACAGCCTCTCTCAGATTTTCCGTTGGGATCTCCTCGTCGGGGAACGATACGGTATCAAAGCCGCCGTGAGAGCCGAACGACGACGTATCGACGAAGAGGATTTGCGGCGTCGAAATCTTCTCTCAGCGGACACCACCAACGCACTCGACGCTCTCTCCCAAGAAGGATTGTCGGAGGAACCAGTGGTGCAACAAGAGAAAGAGGCGGGAGGCAGCACGTGGGAGGTGATTGCGGCGAAGGAGAGGAGGAAGCAGCAGCAGCGGAGAAGGAAGACGGCGAGGATGAAGACGAGCCAGCACCACCACGACGATGAGAACGAGGATCCAGAAGATGACGGCGACGGAGAAGACATGAACGAAGAAGGAATGAACAACAATGGAGGATGCGAGAGACAGAGAGAGCACCCATTCATCGTGACGGAACCTGGGGAAGTGGCACGTGGCAAGAAGAACGGCCTAGATTATCTCTTCCACCTCTACGAACAATGCCGCGAGTTCTTAATCCAAGTCCAGAACATGGCCAAAGAACGCGGCGATAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGAGCGAGCTACATAAACAAGCCCAAGATGCGACATTACGTGCACTGCTATGCGTTGCACTGTTTAGACGAGGAGGTGTCGAATGAACTGAGGATGAGGTATAAGGAGAGAGGCGAGAACGTGGGCGCGTGGAGGCAAGCCTGTTATAAGCCCCTTGTGGCGATTGCGGCGCGTCAGGGTTGGGACATTGATGCTATCTTCAACGCGCATCCTCGTCTCTCCATTTGGTATGTACCTACTAAGCTCCGTCAACTTTGTCACGCCGAGAGGAACACCGCCGCCGCCGCCGCCGGAGCTTCCAGTTCTGTCTCTGTCGGAAGCGCTCACCTCCCCTTCTGA 1212 0.5611 MDPEAFTASIFKWDPRTILSTSALNRPPLPEYTMAPPAPPSAAAFVRGSSREVGGLDELFQAYGIRYYTADKIAELGFTVSTLVNMKDDELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDEEDLRRRNLLSADTTNALDALSQEGLSEEPVVQQEKEAGGSTWEVIAAKERRKQQQRRRKTARMKTSQHHHDDENEDPEDDGDGEDMNEEGMNNNGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNMAKERGDKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRMRYKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNTAAAAAGASSSVSVGSAHLPF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1572 403 Pfam Floricaula / Leafy protein SAM domain 52 129 IPR035079 -
Lele24g1572 403 MobiDBLite consensus disorder prediction 148 228 - -
Lele24g1572 403 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 221 385 IPR035209 GO:0003677
Lele24g1572 403 Gene3D Protein LEAFY 222 391 IPR038276 -
Lele24g1572 403 PANTHER PROTEIN LEAFY 1 402 IPR002910 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1572 Lele-ChrLele24 21376789 21378727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1572 1 382 Orphan Transcription Factor Family AT5G61850 64.516 3.56e-158 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lele24g1572 C_LFY_FLO 2.7e-107 CL0123