Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1550 ATGTTCATGCCAAAATCTAAGAGAAGAAAGCAGCCTAGCCTTGATCATCTTGGAGAGATGAAAAAACTGTTAGATGGAGAACAGGGGCAAGTTATTAGCAAGCTTAGGACAAAGAAGCGTCGGAGTAGAAATAGATGGTCAGCTGAAAGAATGTGGGAGATATTAAAGGCTGCAGATACAAATTTTGCAAACCCAATTTCACGACATGCTCTAAGAGAGGAAGCCCGTCAGCACATTGATGATACTGGACTTTTAGACCACTTACTGAAGCAAATTGATGGTAAAGTAGCACCTGGAGGGGCTGAACGGTTTCAACGGTGGCACAGTTCCACAGGAATTATGGAGTATTGGTTGGAGAGTGCTCACCTAGATAAATGGACACAGAAGGAATTGGTGACGTTGAAAGCTATGACTGAAGAGCGCTTAACTGGGATTATTACTTCTTTGAAGGGTATGCAGGAAGTTAAGGCTTTTTCTTGGTGGTCATTACCAAGAGACGAGCAAGATCAACCTGATGGGACTCCTTGTTCTTCAATGACTGTTAGTTCAAAATCAGAGCTAGACAACAACACATTCATATTGATTCAGCTGTTTCCATGGAAAGATAAAATCGAGCAGCAGCTTTTGGAGGTATCAAATTCCGTACATATGCTGGCAACGAAGTATACCACGGCCAGCGTATCAAAGAACACAAGAATGAAGAAATCGAGCACTTATACTTTACCATCAAAACCCACCTGGGTTCTTCCCTATCGGACCCAAATCCTCACAGAGCTTTACACATTGGGCAGAAAATTGGGTCAAGGTCAATTTGGTACTACTTTCCTTTGTACAGAGAAGTCCACGGGTCGCAGTTATGCCTGCAAGTCAATTCCTAAGCGCAAGCTCATCTGCAAAGAGGACTACGATGATGTTTGGAGGGAGATTCAGATAATGCATCACTTGTCTGAGCACCCTCATGTGGTAAGAATTCATGGTACCTACGAGGACTATGTTTCTGTTCACTTGGTCATGGAGCTCTGCGAAGGTGGAGAGTTGTTCGATAGGATTGTGCAGAAAGGGCATTACAGTGAGAGACAAGCAGCCAAGATCATTCGGACCATTGTTGAGGTTGTTGAAGCTTGTCATTCTCTTGGGGTTATGCATAGAGACCTCAAACCAGAGAACTTCTTATTCGATAGCGTCGAAGAAGATGCCAAACTTAAGGCAACTGATTTCGGGCTGTCTGTTTTTTACAAGCCAGGTGAAACATTTTCTGATGTTGTTGGAAGCCCGTATTATGTTGCGCCAGAGGTGTTGCGCAAACATTATGGGCCTGAATCAGATGTGTGGAGTGCAGGGGTTATTTTGTACATTTTACTTAGTGGGGTGCCACCATTTTGGGCTGAAAGTGAAACAGGGATCTTCCGACAGATTTTGGAAGGAAAAATTGATTTTCAGTCTGAACCATGGCCTAGCATTTCAGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGACCAAAATCCCAAAAAAAGGCTTACAGCCCATGAAGTACTCCGCCACCCATGGATTGTTGATGACAGCATTGCTCCAGATAAGCCTCTTGATTCTGCTGTTTTGTCACGCTTGAAGCAGTTCTCCGCAATGAATAAGCTCAAAAAGATGGCTTTGCGAGTTATAGCTGAGAGGCTCTCTGAGGAAGAAATCGGTGGCCTGAAGGAGTTATTCAAAATGATCGATACCGACAACAGTGGAAACATAACATTTGACGAGCTAAAAGACGGTTTAAAGCGAGTAGGATCCGACCTTATGGAGTCAGAAATCAAGGATCTTATGGATGCAGCTGATATTGATAATAGTGGGACCATTAGTTATGGTGAATTCATTGCTGCTACTATACACTTGAATAAGCTGGAGAGGGAAGAGAATCTGTTATCAGCTTTCTCCTACTTTGACAAAGATGGAAGTGGCTACATAACTGTTGATGAGATTCAACAGGCTTGTAAAGAGTTTGGTCTCAATGACTTCCATATTGATGAAATGATCAAGGAAATCGATCAAGACAATGATGGGCAAATAGATTATGGGGAATTTGCAGCGATGATGAGAAAGGGGAATGGAGGGATTGGAAGGCGAACAATGAGGAAGACTTTGAATTTGAGGGATGCTTTTGGATTTATAGGCAATGGTTCCAATGATTCTCAGCTCTAG 2193 0.4286 MFMPKSKRRKQPSLDHLGEMKKLLDGEQGQVISKLRTKKRRSRNRWSAERMWEILKAADTNFANPISRHALREEARQHIDDTGLLDHLLKQIDGKVAPGGAERFQRWHSSTGIMEYWLESAHLDKWTQKELVTLKAMTEERLTGIITSLKGMQEVKAFSWWSLPRDEQDQPDGTPCSSMTVSSKSELDNNTFILIQLFPWKDKIEQQLLEVSNSVHMLATKYTTASVSKNTRMKKSSTYTLPSKPTWVLPYRTQILTELYTLGRKLGQGQFGTTFLCTEKSTGRSYACKSIPKRKLICKEDYDDVWREIQIMHHLSEHPHVVRIHGTYEDYVSVHLVMELCEGGELFDRIVQKGHYSERQAAKIIRTIVEVVEACHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGLSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAESETGIFRQILEGKIDFQSEPWPSISDSAKDLIRKMLDQNPKKRLTAHEVLRHPWIVDDSIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGNITFDELKDGLKRVGSDLMESEIKDLMDAADIDNSGTISYGEFIAATIHLNKLEREENLLSAFSYFDKDGSGYITVDEIQQACKEFGLNDFHIDEMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRKTLNLRDAFGFIGNGSNDSQL 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1550 730 SMART serkin_6 260 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1550 730 FunFam calcium-dependent protein kinase SK5 555 627 - -
Lele24g1550 730 CDD EFh 566 625 IPR002048 GO:0005509
Lele24g1550 730 ProSitePatterns EF-hand calcium-binding domain. 574 586 IPR018247 -
Lele24g1550 730 MobiDBLite consensus disorder prediction 1 20 - -
Lele24g1550 730 Gene3D Phosphorylase Kinase; domain 1 262 345 - -
Lele24g1550 730 CDD STKc_CAMK 260 517 - -
Lele24g1550 730 Gene3D Transferase(Phosphotransferase) domain 1 346 521 - -
Lele24g1550 730 SMART efh_1 637 665 IPR002048 GO:0005509
Lele24g1550 730 SMART efh_1 671 699 IPR002048 GO:0005509
Lele24g1550 730 SMART efh_1 565 593 IPR002048 GO:0005509
Lele24g1550 730 SMART efh_1 601 629 IPR002048 GO:0005509
Lele24g1550 730 PANTHER SERINE/THREONINE-PROTEIN KINASE 237 692 - -
Lele24g1550 730 ProSiteProfiles Protein kinase domain profile. 260 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1550 730 SUPERFAMILY EF-hand 557 698 IPR011992 -
Lele24g1550 730 Gene3D - 631 728 - -
Lele24g1550 730 Gene3D - 522 627 - -
Lele24g1550 730 ProSiteProfiles EF-hand calcium-binding domain profile. 597 632 IPR002048 GO:0005509
Lele24g1550 730 Pfam EF-hand domain pair 636 697 IPR002048 GO:0005509
Lele24g1550 730 Pfam EF-hand domain pair 566 626 IPR002048 GO:0005509
Lele24g1550 730 CDD EFh 638 697 IPR002048 GO:0005509
Lele24g1550 730 ProSiteProfiles EF-hand calcium-binding domain profile. 671 702 IPR002048 GO:0005509
Lele24g1550 730 ProSitePatterns EF-hand calcium-binding domain. 610 622 IPR018247 -
Lele24g1550 730 ProSitePatterns Protein kinases ATP-binding region signature. 266 299 IPR017441 GO:0005524
Lele24g1550 730 ProSiteProfiles EF-hand calcium-binding domain profile. 561 596 IPR002048 GO:0005509
Lele24g1550 730 FunFam Calcium-dependent protein kinase SK5 631 726 - -
Lele24g1550 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Lele24g1550 730 ProSitePatterns EF-hand calcium-binding domain. 680 692 IPR018247 -
Lele24g1550 730 Pfam Protein kinase domain 260 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1550 730 FunFam Calcium-dependent protein kinase SK5 346 530 - -
Lele24g1550 730 SUPERFAMILY Protein kinase-like (PK-like) 234 541 IPR011009 -
Lele24g1550 730 ProSitePatterns EF-hand calcium-binding domain. 646 658 IPR018247 -
Lele24g1550 730 FunFam Calcium-dependent protein kinase 1 262 345 - -
Lele24g1550 730 ProSiteProfiles EF-hand calcium-binding domain profile. 633 668 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1550 Lele-ChrLele24 21247892 21257769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1550 242 727 EF-hand Containing Proteins AT1G35670 77.959 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele24g1550 Pkinase 6.8e-79 CL0016