Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1545 ATGGTCCGATCTCCTTGTTGCGAGAAACAACACACCAACAAAGGAGCTTGGACAAAAGAAGAAGACCAACGCCTCATCAACTACATCTCCCTCCATGGCCAAGGCTCCTGGCGTTCCCTCCCCAAAGCTGCTGGTTTACTGAGATGTGGGAAAAGTTGCAGGCTCAGATGGATTAACTATCTAAGGCCTGATCTGAAGAGAGGCAATTTTACTCAGGACGAAAACGACCTTATCATTAATCTTCACAGCTTACTCGGAAACAAGTGGTCTCTTATAGCAGCTAGGTTACCGGGTAGAACCGATAATGAGATCAAGAACTATTGGAACACCCACATCAAGCGCAAACTCTATAGCCTTGGAATCGACCCTCAAACGCACCGTCCACTTACCTCAGGCGCAGCAGCAACCACCCCCACCCCCACCACTCCGGCGATCGGCGGTAACAAGAGAAGTACCAGTAACGACAAGAATAACCCTAAACTGAAGCTAGTCTCATCGTCAGGGGGATATTCAAATAGCAATAGTAGCAGTGGGATTACCACAGACGAATCAGCCAATTCTGATAATCATCATCATCAACTCATCAACTTGGAGCTCTCCATAGGTTTTCCTTCTTCCTCTAACGATGACAATAAAACCATCGTCGTTCGCCCTTCATCAGTAGTCTCAGACGACAACTTAAAGAGGCAACGACGACATGAGGAGGAAGAAGTGTGTTTTTGTTGCAGTTTAGGGTTTCAGAGCGTTGATGGTGGTAATAATCAAGCATGTAGGTGCAAAGCCAAGAGGAATAGTACATGTTCAGTGATTACTACTGCACCTACTTCTACTGCTGCATCAGACAATAACGTTTTCAGATTTTTTACTCCCTTCAATATTTCTTAG 885 0.4554 MVRSPCCEKQHTNKGAWTKEEDQRLINYISLHGQGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQDENDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSLGIDPQTHRPLTSGAAATTPTPTTPAIGGNKRSTSNDKNNPKLKLVSSSGGYSNSNSSSGITTDESANSDNHHHQLINLELSIGFPSSSNDDNKTIVVRPSSVVSDDNLKRQRRHEEEEVCFCCSLGFQSVDGGNNQACRCKAKRNSTCSVITTAPTSTAASDNNVFRFFTPFNIS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1545 294 FunFam MYB-related transcription factor 13 66 - -
Lele24g1545 294 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele24g1545 294 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 205 - -
Lele24g1545 294 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele24g1545 294 Gene3D - 14 66 - -
Lele24g1545 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele24g1545 294 MobiDBLite consensus disorder prediction 129 187 - -
Lele24g1545 294 SMART sant 13 63 IPR001005 -
Lele24g1545 294 SMART sant 66 114 IPR001005 -
Lele24g1545 294 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele24g1545 294 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele24g1545 294 MobiDBLite consensus disorder prediction 127 187 - -
Lele24g1545 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele24g1545 294 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele24g1545 294 Gene3D - 69 116 - -
Lele24g1545 294 FunFam Transcription factor MYB39 69 130 - -
Lele24g1545 294 CDD SANT 16 61 IPR001005 -
Lele24g1545 294 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1545 Lele-ChrLele24 21193574 21194767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1545 1 207 MYB Transcription Factor Family AT4G09460 63.084 6.44e-88 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele24g1545 Myb_DNA-binding 1e-14 CL0123