Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1541 ATGACAGCAATAAAGTTCTTCATTTGCTTCTCTCCTTCCAGCTTTCATGGCGGACTCAAGCTAGCAACTGTCTCACCCTTTCCCTTTCTACTCTGCTTTTCCAGAAGTAACAAGAAGTCTCCAGCTGAAATTTTCTTGGACATCAAAGAGACTAACAACATGCTTCGTCCAAAATTAATCACAAGGTTACTGTTATTCCTCAGTGTCTTGAGACTCACTTCTGCAGTCACAAATCCTGATGTAGAAGGCGAAGCTTTGGTTGAAGTTAGGAAGGCTCTTCATGATCCCAACCATCGAATGGCGGATTGGAATTATTTTTTTGTTTCTGCTTGCGTTAGTTGGTCACATGTCACTTGTAGAAACGGACACGTTATAGCTCTGAGCCTGGCTTCATATGGACTTTCTGGAACAATATCTCCTTCAATAACCAGATTGAAGTATTTGTCCAGCTTGGAGTTGCAGAACAACAAATTTTCAGGCCCTTTACCTGATTATATTGCCAATCTGACACAACTTCAATATCTCAATCTTGGAGACAATCATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAACTTCAAAATCTAAAGAATCTGATCCTGAGAGGGAATGATTTATCCGGACCCGTACCAGACACTCTTGCCTATATTAGTGGGTTGGCAGAATTGGATCTTTCATCTAATGGTCTAACTGGAGACATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACTCAATTTCATTGTGGATCTCACTTGGAGCGGCCTTGCGTGTCTAATTCTGCTAACCCAGCTTCTACCAACAAATCAAAAGTTGCAGTGGTTGTGAGTTTCGCTAGTTGTGGTGCATTAGCACTTCTTTGTCTGGGGGCTCTCTTTGCATATAGATACCGATACATACAAAGACACAAAACTGAAGTCTTCTTTGACGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGCTACAACTTGCCACTAAAAATTTCAGTGAAAGCAATGTGATAGGCCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCAGATGACACCAAAGTTGCAATCAAACGTCTAGTTGATTATAATAATCCTGGTGGTGAGGCTGCATTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTACTTCGCTTAATTGGATTCTGCACAACCTCTACTGAGAGAATCCTTGTTTACCCTTTCATGGAAAATCTAAGCGTCGCATATCGCTTGAGAGATTTAAAACCTGGGGAGAAAGGCTTGGATTGGCCAGCAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGCTTGGAGTATCTCCATGAGCAATGTATTCCCAAGATCATACACAGGGATTTAAAAGCTGCAAACATCTTATTAGACAATGACTTTGAAGCTGTACTTGGAGATTTTGGGTTAGCTAAGCTTGTTGATACAAGATTGACCCATGTTACCACTCAGGTGAGAGGCACAATGGGTCATATTGCCCCAGAATATCTGTCCACAGGAAAATCATCTGAGAAAACCGATGTCTTTGGGTACGGCATAACTCTTCTTGAACTCGTCACCGGTCAGCGTGCCATAGACTTGTCCCGGCTCGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAACTGCTGAGAGAGAAGAGGCTAGAGGACATAGTGGATAGGAATCTGGAGAGTTATGATCCAAAAGAAGTGGAGACAATAGTTCAAGTGGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAGGGAGTGGGTTTAGCACAGCGATGGGCAGAGTGGGAGCAATTGGAAGAGATCAGTAATGAGGAATTCTCATCCCTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCTTCAAGAGGCCATACAACTTTCCACTGCAAGATGA 1995 0.4271 MTAIKFFICFSPSSFHGGLKLATVSPFPFLLCFSRSNKKSPAEIFLDIKETNNMLRPKLITRLLLFLSVLRLTSAVTNPDVEGEALVEVRKALHDPNHRMADWNYFFVSACVSWSHVTCRNGHVIALSLASYGLSGTISPSITRLKYLSSLELQNNKFSGPLPDYIANLTQLQYLNLGDNHFSGSIPASWGKLQNLKNLILRGNDLSGPVPDTLAYISGLAELDLSSNGLTGDIPMQLFSVPSFNFSNTQFHCGSHLERPCVSNSANPASTNKSKVAVVVSFASCGALALLCLGALFAYRYRYIQRHKTEVFFDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPGEKGLDWPARKRVAFGTAHGLEYLHEQCIPKIIHRDLKAANILLDNDFEAVLGDFGLAKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLREKRLEDIVDRNLESYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAQRWAEWEQLEEISNEEFSSLSHHFAWADESTLQEAIQLSTAR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1541 664 Gene3D Phosphorylase Kinase; domain 1 312 419 - -
Lele24g1541 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lele24g1541 664 Gene3D Ribonuclease Inhibitor 79 263 IPR032675 -
Lele24g1541 664 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 80 239 - -
Lele24g1541 664 SUPERFAMILY Protein kinase-like (PK-like) 321 616 IPR011009 -
Lele24g1541 664 SMART serkin_6 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1541 664 ProSiteProfiles Protein kinase domain profile. 343 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1541 664 SUPERFAMILY L domain-like 83 252 - -
Lele24g1541 664 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lele24g1541 664 Pfam Protein kinase domain 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1541 664 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Lele24g1541 664 Gene3D Transferase(Phosphotransferase) domain 1 420 636 - -
Lele24g1541 664 FunFam Somatic embryogenesis receptor-like kinase 1 420 636 - -
Lele24g1541 664 FunFam Somatic embryogenesis receptor kinase 1 312 419 - -
Lele24g1541 664 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
Lele24g1541 664 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 63 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1541 Lele-ChrLele24 21150543 21154627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1541 64 659 Receptor kinase-like Gene Family AT5G65240 56.478 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele24g1541 Pkinase 9.5e-44 CL0016