Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1530 ATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGGCTCCTGCACTAAGGATTATTCAATTCAGCATGCTTCCTTTGAGGGACCTCGCCGATGCAATAACTGAAAAATTGCAGGAACAGCTTTATGTGGGTGCGGAGCTGCATGGAAAAAAGGATGACGGGGAGCATCCCTGCAAAATATTGAAAGTCGTGCAAGAAGGAGTTGATGAATCCCGTTATGAGGTAGCTTGGCTTGACAAGAACAAGAGAACAATAAAAAACGCAGAAGTCAGTGCCAAGGATTTGGTGCAGAAGAAATTTCCTTTTAGCAGGAACATCTTGAAATCTTTTATCCGGGAATCTACATATCGAAATGCTCCATGGGTGATACATGTTGAATTGGCCCAAAATTATGGAATCTCAACTGATATCCCAGAGGAATTAAAAGGAAGAGCTTTCTTCAACAACGGACTTTTAATTTGCAACAAGAAAAGGAAAAATGAGGATATAAATGGAGAAGCTGAAAATTGCAAAAGGAGTAAGTCGGATCATTCAGTGAAAGAAAATGGCCAATGTAAGGAAGAACCTATCAAATATCCGATTGAAGATTTGTTGGTGAAGCCTAGACCAAATGATCCTGATTGTCCTTCTCCATCGAGAGACTTCATTGTTCCAATTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGTCACCCTACTCTCTGGAAGATTTTGAAAACTCAATCTGCCACAAGGAAAGCAACGTGGTTCTCCTTGTAGAATCTCATGCAGCACTCTTGCGGGTGCTTATGAAAGACGATGGTGAGTATGCTTCAGCTGTACAGAAAAGAAAACGGAAGTTTAAGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACGGCAGTTTGAAGCTACTACCATAAAAAGGGGACATTATGGCCTCGTTGATATCAATGCTAAGCTAGAAATCCTGTACGAATTGGTCAATCAAGTTCTTGAAACTTCCATTTTTAGGGAAAAATTGGACGAAGTTATTGAACAGCGGCAGGCACTTGGTGCTACTAGAAGAGGAGAAGCGCTAGAAGATGGTAGAAAAAGACGAGAAGAAAAGGAACGGTTGAAAGGTGAGTTTGAGAGCAATGGAAGTATGGATGGGCACTGTCAAATAAGTGTAGCAACTGTCTCAACAAAAAATAATAACAGTAAACAGAACGGAGAAATAGGAAAGAAAAGAAATGGAGAGAAGGAATCATCTAGGAACGGGGATGCTTTGGGTGGAAGTATGGATAAGCATTCAAACGGTGCATCCAAAAAGTCATCTAAGAAGCTGAGTTTAGAACTGAAAGAACCAGCAGAAAATGAAAATGACTCATCCAGAAAGGAATCCCAGAAGCAATTAAACGGGGAGAAGAATCCATCAGAGAAGAATAGTTTTGAACAGAGGAGAGAATATTTTGAACGAGAGATGGAAAAACGATTTGTTCGTACAAGTCCCCTAGGTAAAGACAGGCATTACAACAGGTATTGGTGGTTTCGCCGTGATGGGAGGCTATTTGTAGAAAGTTCTGATTCCAAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGCTTGAGGCATTGATGAGGTCACTGAATCGCAAGGGTGTGCGGGAAAGAGCATTGCACAAGCAACTGGAAAAATATTATAGTAAAATATGCACGGAACTTCAGAAGAGGTCAAAGGATCAGATACAGAAGATCGCACTAGATGAGTCTGTGCTCCGTAGGTCGACTCGTGTTCGAGCGCCCCCTAGAGAAAATCCCGCCAATGCTTTCCTCAAATATGTTAACAAGTGGAAGGAAGAGTAG 1914 0.4112 MVSEKRATEKVQQIPKELMAPALRIIQFSMLPLRDLADAITEKLQEQLYVGAELHGKKDDGEHPCKILKVVQEGVDESRYEVAWLDKNKRTIKNAEVSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHVELAQNYGISTDIPEELKGRAFFNNGLLICNKKRKNEDINGEAENCKRSKSDHSVKENGQCKEEPIKYPIEDLLVKPRPNDPDCPSPSRDFIVPIHCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENSICHKESNVVLLVESHAALLRVLMKDDGEYASAVQKRKRKFKITMINWQEYLCDFLEMINVPGLRQFEATTIKRGHYGLVDINAKLEILYELVNQVLETSIFREKLDEVIEQRQALGATRRGEALEDGRKRREEKERLKGEFESNGSMDGHCQISVATVSTKNNNSKQNGEIGKKRNGEKESSRNGDALGGSMDKHSNGASKKSSKKLSLELKEPAENENDSSRKESQKQLNGEKNPSEKNSFEQRREYFEREMEKRFVRTSPLGKDRHYNRYWWFRRDGRLFVESSDSKEWGYYSSKEELEALMRSLNRKGVRERALHKQLEKYYSKICTELQKRSKDQIQKIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1530 637 MobiDBLite consensus disorder prediction 464 502 - -
Lele24g1530 637 ProSiteProfiles WAC domain profile. 1 62 IPR013136 -
Lele24g1530 637 MobiDBLite consensus disorder prediction 378 402 - -
Lele24g1530 637 MobiDBLite consensus disorder prediction 376 502 - -
Lele24g1530 637 ProSiteProfiles DDT domain profile. 226 287 IPR018501 -
Lele24g1530 637 MobiDBLite consensus disorder prediction 406 429 - -
Lele24g1530 637 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 517 583 IPR028941 -
Lele24g1530 637 Pfam DDT domain 227 284 IPR018501 -
Lele24g1530 637 SMART testlast3 226 287 IPR018501 -
Lele24g1530 637 Coils Coil 85 105 - -
Lele24g1530 637 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 2 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1530 Lele-ChrLele24 21058858 21063088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1530 503 582 Homeobox Transcription Factor Family AT5G44180 41.573 9.05e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele24g1530 WSD 1.1e-22 No_clan