Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1519 ATGGACAAGTACGAGACCGTCAAGGATTTGGGGGCTGGCAACTTTGGGGTCGCCAGGCTTATGAGGAACAAGGAGACCAAGGAACTCGTCGCCATGAAATACATCGATCGTGGCCACAAGATTGACGAGAATGTAGCAAGGGAAATTATGAACCACAGGTCCCTTCGTCATCCCAATATAATCCGCTTCAAGGAGGTGGTTTTGACTCCCACTCATTTGGCTATAGTAATGGAGTATGCAGCTGGAGGGGAGCTCTTTGAGAGGATCTGTACTGCTGGCAGGTTCAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCAATTTCTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGCTGGAAAATACTCTTCTAGATGGAAGCCCTGCGCCTCGCTTGAAGATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACTCCCGCTTACATAGCCCCTGAAGTCCTTTCTAGGCGCGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTCTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGACCAGGCAGATCCCAGGAATTTTAGGAAAACAATTCAGCGCATAATGGCTGTCCAATACAAAATCCCTGATTACGTCCACATATCTCAAGATTGCAGACACCTCCTTTCTCGTATATTTGTCGCAAATCCGTTGAAGAGAATAACTCTCAAGGAAATCAAGCACCACCCATGGTTTTTAAAGAACCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCCACCTATTATCAGAGAGACAACCCAAGCTTTTCCGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCTAGAAACCCACCTCCTGTATCTAGACCTATCAAAGGTTTTGGCTGGGAAGGTGAAGAAGATGAAGGTGAAGATGAGGAAGCTGGGGTGCAGGAAGAGGAGGGTGAAGAAGATGAATATGACAAAAGGGTCAAGGAGGCTCATGCCAGTGGAGAATTTCAAGTCAGTTAA 1065 0.4629 MDKYETVKDLGAGNFGVARLMRNKETKELVAMKYIDRGHKIDENVAREIMNHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICTAGRFSEDEARYFFQQLISGVNFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQADPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLKRITLKEIKHHPWFLKNLPRELTESAQATYYQRDNPSFSVQSVEEIMKIVGEARNPPPVSRPIKGFGWEGEEDEGEDEEAGVQEEEGEEDEYDKRVKEAHASGEFQVS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1519 354 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1519 354 SUPERFAMILY Protein kinase-like (PK-like) 2 297 IPR011009 -
Lele24g1519 354 PANTHER SERINE/THREONINE KINASE 3 294 - -
Lele24g1519 354 MobiDBLite consensus disorder prediction 304 354 - -
Lele24g1519 354 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1519 354 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele24g1519 354 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1519 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele24g1519 354 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele24g1519 354 MobiDBLite consensus disorder prediction 316 335 - -
Lele24g1519 354 CDD STKc_SnRK2 3 259 - -
Lele24g1519 354 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lele24g1519 354 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Lele24g1519 354 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1519 Lele-ChrLele24 21005450 21008258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1519 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 42.279 7.81e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele24g1519 Pkinase 4.9e-71 CL0016