Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1511 ATGCTTCAATCGAGCATTAATGCTCCCGCTCAAGTTCAGGCTCGCCGGAAGGGCATCGGAGTGAAGGTGTGGCTCTTCGTGTCCGAGACTGGGCAGTCGCACCTCGAGGAGATGAGTAAAGAAAATGATAATGAGTTCTCAGCCAATCAACAGCGCCTCCTTCTCTGCGCAACCGTCGTCATTCCCAGTCAAATTAAGGGTTCAGATACGTCAAATATCGATGTTAAAGAGGATAGTCATAAGAGTCAGATGATGAGCCAGTGGCTGCAGCTCCTAAGCAGTTGCCTTTGGAACTTAGAGCACTTGAAGCTTGTGTTGAATCTGAGAGCTGAAGATTCCAATTCAGAACACACTGACATTTCTACTACTGTTAAGCCCGACGTTGAGGAATTGGAGATGCTCATACAAGCGTATTTTGCACAGTTAGATGGCATATTGCAAAAACTGTCCGATATGAGTGAGTACGTGGACGACACAGAGGACTACATCAACATAATGTTGGATGATAAGCAGAATCAGCTGCTGCAGGTATCAGTAAAACTCAATACAGCAAACTTGATGCTAGGTGCCGGCATCGCGGTGGTGGGTTTGTTTGGGATGAATATTCATATCAGTTTGTATGATGGAACAAATAGACGATTCTCGGGAATAGATAACACTTTAAGTGCGTCTTGGTGGGACTCTGGTTGTTTTAGCTTCCCACATGAGCTCATGATCATTTGCAGAGCTTCAAGCACCGATCTTGGAGCTCAATGGCCTCCATGGTTACCATCGAAAGCAAACCCACGATTTTTGAGGAGCTCTTTCCCAGGCAAATCTTCTCAGCTTAAGAAGGGTTTTGTGTTTTCCTCGATTAAAAGGGTTCAGTGGAAACCCAGAAGCGACTTCTCTGTCAACAACAATTACTGTAACAGAAGCCCTGGGAAGGAAGGCAATGTTCGGCAAGAAGAGGATGGTGACCGTGAGGTGCATTGTGAGGTCGAAGTGACATCATGGAGAGAACGGAGTGTTAAAGCAAAAATTTCAATCGATGCAGATATCGAATCAGTTTGGAATGCTCTTACAGATTATGAGCATCTAGCCGATTTCATCCCAAACCTTGTCTGGAGTGGGCGAATTCCTTGCCCTTATCCAGGAAGGATATGGTTAGAGCAAAGGGGCTTCCAAAGGGCAATGTATTGGCATATAGAAGCTCGCGTTGTATTGGATCTTCGAGAATCCATCAATTCAGCATGTGATCGAGAACTTCACTTTTCCATGGTTGATGGAGACTTTAAGAAGTTTGATGGCAAATGGTCCTTAAAATCTGGAACAAGGTCATCAACAACTATTTTGTCCTATGAAGTTAACGTGATACCAAGGTTTAATTTCCCAGCTATTTTCTTGGAAAGGATTATTAGGTCAGATCTTCCTGTCAACCTTCGAGCCTTGGCTTATAGAGTTGAAAAGAACTTGTTGGGAAATCAGAGGCCTCCAGTGCCAGATGATTACTTGAATAAAGATTCTGTGGCTATAAATGGGTCAACTGGCAAAAAGATAAATGGTACTTTTCATGAAAGCGATCAATTGTCTTCTGGAGAGAGCAAAGAAGGTCTTGCTGGCTCAATTTCTGGCTCCTTGCCTGTAGCTTCCGGTGAAGTCAACAACAACTGGGGTGTGTTTGGAAAGGTTTGCAGACTTGACAAGCCTTGCGTGGTGGATGAAGTTCACCTCCGCAGATTTGATGGACTTTTGGAAAATGGAGGTGTTCATCGCTGTGTTGTTGCAAGTATCACTGTTAAAGCTCCTGTCCGTGAAGTATGGAATATTCTGACTGCCTATGAGAGTCTTCCTGAGATCGTTCCAAATTTAGCAATCAGCAGAATTTTATTCCGAGACAACAATAAAGTTCGTATTCTTCAGGAGGGGTGCAAGGGTCTGCTTTATATGGTACTTCATGCTCGCGTGGTGCTAGACTTGTGTGAACATCTTGAACAGGAGATCAGTTTTGAACAGGTTGAAGGGGACTTTGACTCATTCCAGGGAAAATGGATTTTTGAGCAACTAGGGAATCATCACACTTTGCTGAAGTACTCTGTGGAGTCAAAAATGCGCAAAGACACATTCCTTTCTGAAGCAATCATGGAGGAGGTTATTTATGAAGATCTCCCATCAAACTTATGTGCAATAAGAGACTACATAGAGAACAGAGAGGCATCCAATTCATCAGCAGAGAGTGAGCAGGAAAGCGATTCAGCGTATCAAGTTCTTTCATCTGACTTTGAAGGAGATGATGAATATAGTTCAGCTGAAGAGATTTCTAATGATGATGTCGAAAGTTCATCATATCAACAAAGGCCTAGGGTTCCAGGCTTACAGAGGGACATTGAAGTTCTAAAATCTGAAATCTTGAAATTTATTTCAGAATATGGGCAGGAGGGATTTATGCCAATGAGGAAGCAACTGCGTCTGCACGGACGGGTGGATATTGAGAAGGCTATAACTCGCATGGGCGGTTTCCGGAAAATAGCGACGACAATGAACCTATCTCTAGCTTACAAACACCGCAAACCAAAGGGTTATTGGGACAATTTTGAAAATTTGCAGGAGGAGATTAGTCGATTTCAAAGGAACTGGGGAATGGATCCTTCATTTATGCCCAGTAGAAAGACATTTGAACGTGCAGGGCGCTATGATATTGCTCGTGCACTAGAAAAGTGGGGTGGTCTGCATGAAGTTTCTCGCCTTCTTTCGCTTAAGGTTAGACATCGAGGCAGACAAAATGGTATACCTGCCAAGGACAAGAGAACTGATCATGTAGAATCATCAGCTCATGTATGTAATGAAAACAAGACTCCATCTAAACCATGTGTTGCTCAAGATGCACGTAAGTGGCTTTCAAAGCTAAAACATATGGACATAAACTGGGTAGAGTAA 2916 0.4338 MLQSSINAPAQVQARRKGIGVKVWLFVSETGQSHLEEMSKENDNEFSANQQRLLLCATVVIPSQIKGSDTSNIDVKEDSHKSQMMSQWLQLLSSCLWNLEHLKLVLNLRAEDSNSEHTDISTTVKPDVEELEMLIQAYFAQLDGILQKLSDMSEYVDDTEDYINIMLDDKQNQLLQVSVKLNTANLMLGAGIAVVGLFGMNIHISLYDGTNRRFSGIDNTLSASWWDSGCFSFPHELMIICRASSTDLGAQWPPWLPSKANPRFLRSSFPGKSSQLKKGFVFSSIKRVQWKPRSDFSVNNNYCNRSPGKEGNVRQEEDGDREVHCEVEVTSWRERSVKAKISIDADIESVWNALTDYEHLADFIPNLVWSGRIPCPYPGRIWLEQRGFQRAMYWHIEARVVLDLRESINSACDRELHFSMVDGDFKKFDGKWSLKSGTRSSTTILSYEVNVIPRFNFPAIFLERIIRSDLPVNLRALAYRVEKNLLGNQRPPVPDDYLNKDSVAINGSTGKKINGTFHESDQLSSGESKEGLAGSISGSLPVASGEVNNNWGVFGKVCRLDKPCVVDEVHLRRFDGLLENGGVHRCVVASITVKAPVREVWNILTAYESLPEIVPNLAISRILFRDNNKVRILQEGCKGLLYMVLHARVVLDLCEHLEQEISFEQVEGDFDSFQGKWIFEQLGNHHTLLKYSVESKMRKDTFLSEAIMEEVIYEDLPSNLCAIRDYIENREASNSSAESEQESDSAYQVLSSDFEGDDEYSSAEEISNDDVESSSYQQRPRVPGLQRDIEVLKSEILKFISEYGQEGFMPMRKQLRLHGRVDIEKAITRMGGFRKIATTMNLSLAYKHRKPKGYWDNFENLQEEISRFQRNWGMDPSFMPSRKTFERAGRYDIARALEKWGGLHEVSRLLSLKVRHRGRQNGIPAKDKRTDHVESSAHVCNENKTPSKPCVAQDARKWLSKLKHMDINWVE 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1511 971 Pfam Polyketide cyclase / dehydrase and lipid transport 593 724 IPR005031 -
Lele24g1511 971 Pfam Polyketide cyclase / dehydrase and lipid transport 343 477 IPR005031 -
Lele24g1511 971 MobiDBLite consensus disorder prediction 920 938 - -
Lele24g1511 971 CDD SRPBCC_11 587 728 - -
Lele24g1511 971 Gene3D - 336 485 IPR023393 -
Lele24g1511 971 Gene3D Magnesium transport protein CorA, transmembrane region 74 174 - -
Lele24g1511 971 SUPERFAMILY Bet v1-like 588 732 - -
Lele24g1511 971 Gene3D - 578 738 IPR023393 -
Lele24g1511 971 SUPERFAMILY Bet v1-like 337 483 - -
Lele24g1511 971 MobiDBLite consensus disorder prediction 920 947 - -
Lele24g1511 971 MobiDBLite consensus disorder prediction 758 782 - -
Lele24g1511 971 CDD SRPBCC_11 337 483 - -
Lele24g1511 971 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN 321 868 - -
Lele24g1511 971 MobiDBLite consensus disorder prediction 510 530 - -
Lele24g1511 971 MobiDBLite consensus disorder prediction 767 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1511 Lele-ChrLele24 20920167 20929105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1511 113 207 MRS2 Gene Family AT3G19640 64.211 1.49e-30 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1511 24 20920167 20929105 Lele24g1511 24 20920167 20929105 ECH
Lele21g1567 21 23806197 23816996 Lele24g1511 24 20920167 20929105 hybridization
Lele22g1548 22 21142387 21155162 Lele24g1511 24 20920167 20929105 hybridization