Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1503 ATGATGCCGGCAATATCCAGCGACCAATCGTTCTCCTTCACTCTCGGCCTTGAAGTGCGTCATGCAGTTCTGGATCTAGGTTCATTATTGACAAAAATCCTTATACTGTTTCCAAACACATTATACGACGAGATTCACCGTCAAAGCTACGGAACGCATCGTGGAAGCAGAAAAGCCATACATGGCCTAGCTTACTTTGCTTCATCAACAAACCCTAAAACTGCAGATAGAGTTTTATTTGAATGCCACTCTTTTCCTCTCGTCATGGCATACATTGCCTCAACTGCTTCTGCCACATTTTCGGCTCTCCAGCGCGGGGCAAGTCAACAGAGTAAAACTTTTCCAGGCTTTTCGAGAAGTAGGGGAATTCATTCATTGTTATTTACAAATTATTCGAGGAAACGGTTGCAAGTACGATTGTTTTCTTCTGGGACAAATCGCAGCAATGGAGATATTGTGGAGACATCCGAGAGCGAAAAGAAACTGATGAACTACGCTTGGCCTGATACAAGGAAGCCTAGGGTGTGCATATTGGGTGGTGGATTTGGCGGTTTATATACTGCATTAAGGTTGGAGTCACTTGTGTGGTCTGAAGACAAAAAGCCACAGGTTCTTCTTGTTGACCAGTGTGAACGTTTTGTTTTCAAGCCCCTGTTGTACGAGCTTCTTTCTGGAGAAGTGGATGAATGGGAAATAGCTCCCCGGTTCTTAGATTTGCTGGCAAACACTAGCGTCCAGTTTTTGCAAGACAGAGTTAAACTTCTGCATCCCTCTGATAATTGGGGGATGGATGGACCGCCAACATCTAGTTGTGGAGGAACTGTGCAACTGGAAAGCGGGCTTTCTATAGAATATGACTGGGCATTTCTGGGCTATCCTGCCAGGCTGGTTCTTGCTTTGGGAGCTGAAAGTAAACTTGATTTTGTACCGGGAGCAACTGATTTTGCATTGCCATTCTCCACACTAGAGGATGCAATTAAAGTTAATAATAATTTAAAAACATTGGAGAGAAAATACTTCAGTAAGGATTCCCAAATCAGTGTGGCAGTTGTTGGCTGTGGTTACTCTGGAGTTGAGTTAGCTGCTACAGTGGCAGAGAGATTAAAGGACAAAGGGGTTGTTAGAGCAATCGATCCTGAGAACATCATCTGCCCAACTGCCCCGCCTGGCAATAGGGAAGCTGCACTGAAAGTTCTTTCATCCAGAAAGGTTGAACTTCTATTGGGTTATCTAGTCCGCTGCATTCGGAGGATGAGTGACTTGGAGTCTTCAGATACCCTGACAAGGGAAGGTGAAAATCAGGGAAATCAAGCTGTACATGATTCTGATAAATATGTTTTGGAGCTGCAACCTACCGAAAGGGGATTACAGAAGAGAAGTCTAGAAGCAGATCTAGTATTGTGGACTGTTGGTTCTAAATCTTCTCTTACTCAGATAGAACCCTCAGATTTATCATATCCGCTTCCTCTTAATGGCCGGGGGCAAGCCGAAACAGATGAAACTCTTCGTGTTAAGGGCCACCCACGGATATTTGCTCTTGGTGACTCCTCTGCAATAAGAGATGCACATGGAAGGATCCTTCCGGCCACTGCACAGGTTGCATTTCAGCAAGCTGACTTTGCTGGTTGGAATCTGTGGGCTGCGATCAATGGCCGTCCACTTTTGCCATTTAGGTTTCAGAATTTGGGTGAAATGATGACGCTGGGAAGAAATGATGCTGCCATTTCTCCCAGTTTTGTTGAGGGATTGACCTTACAAGGTCCGATTGGTCATACAGCAAGGAAACTAGCATATTTGTTGAGGTTACCAACAGATGAACATAGGCTTAAAGTGGGGATCAGCTGGTTCACAAAGTCTGCCATTGATTCAGTAGCTTCACTACAGAGCACCTTAACCAAGGTTCTTTCCGGTTCATAA 1917 0.4471 MMPAISSDQSFSFTLGLEVRHAVLDLGSLLTKILILFPNTLYDEIHRQSYGTHRGSRKAIHGLAYFASSTNPKTADRVLFECHSFPLVMAYIASTASATFSALQRGASQQSKTFPGFSRSRGIHSLLFTNYSRKRLQVRLFSSGTNRSNGDIVETSESEKKLMNYAWPDTRKPRVCILGGGFGGLYTALRLESLVWSEDKKPQVLLVDQCERFVFKPLLYELLSGEVDEWEIAPRFLDLLANTSVQFLQDRVKLLHPSDNWGMDGPPTSSCGGTVQLESGLSIEYDWAFLGYPARLVLALGAESKLDFVPGATDFALPFSTLEDAIKVNNNLKTLERKYFSKDSQISVAVVGCGYSGVELAATVAERLKDKGVVRAIDPENIICPTAPPGNREAALKVLSSRKVELLLGYLVRCIRRMSDLESSDTLTREGENQGNQAVHDSDKYVLELQPTERGLQKRSLEADLVLWTVGSKSSLTQIEPSDLSYPLPLNGRGQAETDETLRVKGHPRIFALGDSSAIRDAHGRILPATAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFVEGLTLQGPIGHTARKLAYLLRLPTDEHRLKVGISWFTKSAIDSVASLQSTLTKVLSGS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1503 638 Gene3D - 170 611 - -
Lele24g1503 638 PRINTS Pyridine nucleotide disulphide reductase class-I signature 174 196 - -
Lele24g1503 638 PRINTS Pyridine nucleotide disulphide reductase class-I signature 347 372 - -
Lele24g1503 638 PRINTS Pyridine nucleotide disulphide reductase class-I signature 510 517 - -
Lele24g1503 638 Pfam Pyridine nucleotide-disulphide oxidoreductase 174 538 IPR023753 GO:0016491
Lele24g1503 638 FunFam Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 170 611 - -
Lele24g1503 638 SUPERFAMILY FAD/NAD(P)-binding domain 169 547 IPR036188 -
Lele24g1503 638 PRINTS FAD-dependent pyridine nucleotide reductase signature 463 479 - -
Lele24g1503 638 PRINTS FAD-dependent pyridine nucleotide reductase signature 347 365 - -
Lele24g1503 638 PRINTS FAD-dependent pyridine nucleotide reductase signature 293 311 - -
Lele24g1503 638 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 194 - -
Lele24g1503 638 PANTHER APOPTOSIS-INDUCING FACTOR 1 107 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1503 Lele-ChrLele24 20863330 20869394 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1503 24 20863330 20869394 Lele24g1503 24 20863330 20869394 ECH
Lele21g1561 21 23758949 23763424 Lele24g1503 24 20863330 20869394 hybridization
Lele22g1543 22 21091365 21096461 Lele24g1503 24 20863330 20869394 hybridization