Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1500 ATGTTTCAAGCCGCAGTGGCATTACAGCGAGAAGCAGAAGAAAGAGAGAAGAGCAGAGGAGGAAGAAGAATGAACGGTGAATTGGAATTACCACCTGGGTTCAGATTCCACCCATCGGACGAGGAGCTGGTGAATCACTATCTCTGTAGAAAATGTGCCGCTCAGTCCATTTCTGTTCCCATTATCAAAGAGATCGATCTCTACAAATTTGATCCATGGCAGCTTCCTGAAATGGCGTTGTACGGCGAGAAAGAATGGTACTTCTTTTCTCCGAGGGACCGAAAATACCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGAAGTGGGTATTGGAAAGCAACCGGAGCCGACAAGCCGATTGGTAAGCCGAAGCCACTGGGAATCAAGAAGGCTCTCGTATTCTACGCCGGCAAGGCCCCCAATGGCATCAAAACGAATTGGATCATGCATGAATATCGCCTCGCTAACGTCGACAGATCCGCCGGCAAGAAAAAGAACCTAAGGCTTGATGATTGGGTGTTATGTCGAATTTACAACAAGAAAGGCACGGTTGAGAAATACAATGTGGTGGATCAGAAAGCCGGCAAGTTATCGGAATTCCATGACCATGAGACCAAACCGGAAATCAAATCGTACGACCACAATAAGGTGCAGGCACCGGCGGCGTTCATAAATGACCAATTCTATATGGACACGTCAGACTCGGTGCCGAGGCTGCACACTGACTCGAGCTGCTCCGAGCACGTGGTTTCGCCGGACGTCACGTGCGACAAGGAGGTACAGAGCGAGCCCAAGTGGAATGAGCTAGGGCTCGGAGGAGAAGTAGATGGGTTCGATTTTGAATTGAATTACCTCTCGGGACAAGATCCTTTCGGCTCTTCTGTACAGTACCAAATGAACCAGCTCTCGCCATTGCAGGACATGTTCATATTTCCGCAGAAGCCATTTTGA 951 0.4984 MFQAAVALQREAEEREKSRGGRRMNGELELPPGFRFHPSDEELVNHYLCRKCAAQSISVPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTVEKYNVVDQKAGKLSEFHDHETKPEIKSYDHNKVQAPAAFINDQFYMDTSDSVPRLHTDSSCSEHVVSPDVTCDKEVQSEPKWNELGLGGEVDGFDFELNYLSGQDPFGSSVQYQMNQLSPLQDMFIFPQKPF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1500 316 MobiDBLite consensus disorder prediction 1 24 - -
Lele24g1500 316 SUPERFAMILY NAC domain 25 180 IPR036093 GO:0003677|GO:0006355
Lele24g1500 316 ProSiteProfiles NAC domain profile. 30 180 IPR003441 GO:0003677|GO:0006355
Lele24g1500 316 Gene3D NAC domain 39 184 IPR036093 GO:0003677|GO:0006355
Lele24g1500 316 MobiDBLite consensus disorder prediction 9 24 - -
Lele24g1500 316 Pfam No apical meristem (NAM) protein 31 154 IPR003441 GO:0003677|GO:0006355
Lele24g1500 316 FunFam NAC transcription factor 39 184 - -
Lele24g1500 316 PANTHER NAC TRANSCRIPTION FACTOR 56 30 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1500 Lele-ChrLele24 20847224 20848450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1500 24 316 NAC Transcription Factor Family AT1G01720 63.211 1.18e-125 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g1500 NAM 4.9e-38 No_clan