Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1489 ATGTCTGAAAGAGGAAAGAGGAAGGATGAGCAGGATCACTCTTCCGACGGCGATTCTGAGGGTCACGCGCCACCCAAGAAGTTCCAGAAGAAGGATTCCAGTGAGACTGATGACATCGTCGTCTGTGAGATATCTAAGAACAGACGAGTGACTGTGAGGAACTGGAATGGCAGGATTTGGGTGGATATTCGGGAATTTTACCTCAAAGATGGGAAGCAATTGCCGGGAAAGAAAGGTATCTCGCTGAGCATTGACCAGTGGAAGGTGCTTCGGGATCATGTTGATAAGATTGACAATGCTCTTACAGAGGATTCCTAG 318 0.478 MSERGKRKDEQDHSSDGDSEGHAPPKKFQKKDSSETDDIVVCEISKNRRVTVRNWNGRIWVDIREFYLKDGKQLPGKKGISLSIDQWKVLRDHVDKIDNALTEDS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1489 105 FunFam Putative transcriptional co-activator 32 105 - -
Lele24g1489 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Lele24g1489 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Lele24g1489 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 12 103 IPR045125 GO:0003713|GO:0060261
Lele24g1489 105 MobiDBLite consensus disorder prediction 1 36 - -
Lele24g1489 105 Gene3D Transcriptional Coactivator Pc4; Chain A 29 105 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1489 Lele-ChrLele24 20721745 20723401 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele24g1489 PC4 1.2e-25 CL0609