Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1486 ATGAAGCTGACCGGAGACAGTATGGCGTCCGACGAAGGCACTTGTGACTGCGACGGTGGTCGGACGGTTGTCGTTGGGGTGAAGTTGGATCCTCGGAGCAGGGAATTGCTCACATGGGCGCTCGTCAAAGTGGCGGAGCCTGGTGACCATGTCATTGCGCTTCACGTGATCGGCAGTATGCCTGCGGGTACGGGATCGCTTCTCTCTCTTGTAAATACTTTTGATTCTGTTCTCGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTCAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTCTTGTACGGGAGGCGAAATCGTTTGGTGCATCAACTGTAATCGTCGGGACTTCTAAAACGCATCACACAATCCGGTCATCGGCATCCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCGGTTGACAATGGCAAAATTGCATTCCACAGAGAGGCTACAAAAATATGTGGTGATCTAGTAAAACTAAATGAAGGCCCAGCTTTGTCAAGAAAATCCTTCAAGCCCTGTGCAAAGACAAATCTAAGGAACTGTGAATGTTGTGAGCGGGTGCTAGCACTTCCAGAGAGTGCTGCTATTGAAGATTTAACTGATGATCAGGAAAAGAAAGATTCACTAGCTTCAGTACCGCTCCAGAAAATTGGCAATGGTCATAGTTGTGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGTTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAGAAAGCACATGCAGAAATCGTATGTGAGCAATCCATATGTTTTTCAACGGGCAGTTAAACAGACCAGCTGGCATTCATCAGCTGTAGTCCATCCAGACCTTAAACAAATTAATATTGACAAAAATGACAGTACTACCCTTGATGGGCAGAGTGGTACCATTGTGCCATTCAGATCTGCTGTTAACTCTGGCTTGAGTAACTTTCATGAAGAGTTGTCCAGCTTATCGGAGAAGTACTCATCGTCATGCAGAGTGTATAGTTTCCAAGAACTTGCTTCTGCAACTGCTAACTTCTCGTGTGAAAATTTGGTTGGCAAAGGTGGCAGTAGCTATGTTTATAAAGGATGTCTTCTAGATGGCAAGGAGGTAGCTGTGAAAATTTTGAAGCCATCAGAAGATGTCGTCAAAGAGTTTCTTTTGGAAATTGAGATCATCTCAACTTTGCATCATAAGAATATAATATCTTTATCTGGGTTTTCTTTTGATGACAATAATTTGCTTTTGGTTTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTCGGTTGGCAAGAGAGGTATAGGGTGGCTGTAGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTGCAGAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCTGATTTTGGACTGGCCAGTTGGGGTTCTGCTTCATCCCATGTTACTTGTACTGATGTGGCTGGAACCTTCGGATACCTTGCTCCAGAGTACTTTATGCATGGTAGGGTAACTGACAGAATTGATGTATACGCTTTTGGTGTTGTGCTTCTTGAGCTTCTTTCTGGCAGGAAGCCCATCAATAACGAATCCCCTAAGGGCCAGGAGAGCCTCGTGATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCATTGGCGATCCTGAAAATTGTTTGATTGACAGAATGGTTTTGGCTGCTACCCTTTGCCTCAGACGATCACCTAAATGTCGACCTCAAATCTGCATCATATTGAAACTTCTGCATGGTGATGGGGAAGTCACAAGTTGGGCAAAACAAGAAGTTGGGGAACCAGAAGAGCTCGACGCATTTGATGGTGGACTGAACAATATTCAATCCCATCTGAACCTTGCTTTGCTGGACATGGACGATGATACAATTTCTGTAAGTAGCTCTGATCAGAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCATCAAGTTTTGATTAA 2100 0.4433 MKLTGDSMASDEGTCDCDGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVIGSMPAGTGSLLSLVNTFDSVLAVYEGFCNLKQVDLKLKVCRGESARKLLVREAKSFGASTVIVGTSKTHHTIRSSASVAKYCAKKLPKCISVFAVDNGKIAFHREATKICGDLVKLNEGPALSRKSFKPCAKTNLRNCECCERVLALPESAAIEDLTDDQEKKDSLASVPLQKIGNGHSCATVVQESNQSKHGWSVLRQVFLPRKHMQKSYVSNPYVFQRAVKQTSWHSSAVVHPDLKQINIDKNDSTTLDGQSGTIVPFRSAVNSGLSNFHEELSSLSEKYSSSCRVYSFQELASATANFSCENLVGKGGSSYVYKGCLLDGKEVAVKILKPSEDVVKEFLLEIEIISTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFGWQERYRVAVGVAEALDFLHNGCAEAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSASSHVTCTDVAGTFGYLAPEYFMHGRVTDRIDVYAFGVVLLELLSGRKPINNESPKGQESLVMWARPILKDGKLSQLLDSSIGDPENCLIDRMVLAATLCLRRSPKCRPQICIILKLLHGDGEVTSWAKQEVGEPEELDAFDGGLNNIQSHLNLALLDMDDDTISVSSSDQSVSLEDYLQGRWSRSSSFD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1486 699 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Lele24g1486 699 ProSiteProfiles Protein kinase domain profile. 358 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1486 699 SMART serkin_6 358 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1486 699 Gene3D Transferase(Phosphotransferase) domain 1 433 643 - -
Lele24g1486 699 Pfam Universal stress protein family 21 145 IPR006016 -
Lele24g1486 699 Pfam Protein kinase domain 361 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1486 699 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 327 432 - -
Lele24g1486 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Lele24g1486 699 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 144 - -
Lele24g1486 699 SUPERFAMILY Protein kinase-like (PK-like) 338 627 IPR011009 -
Lele24g1486 699 Gene3D Phosphorylase Kinase; domain 1 328 432 - -
Lele24g1486 699 Gene3D HUPs 20 153 IPR014729 -
Lele24g1486 699 FunFam Putative receptor-like serine/threonine-protein kinase 433 643 - -
Lele24g1486 699 PANTHER OS08G0249100 PROTEIN 73 640 - -
Lele24g1486 699 CDD USP_Like 22 147 - -
Lele24g1486 699 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1486 Lele-ChrLele24 20689143 20692390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1486 346 698 Trihelix Transcription Factor Family AT1G70460 40.659 1.76e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele24g1486 Pkinase 1.2e-41 CL0016