Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1464 ATGTTCATTTCGTGTTTCGTTAACTTTGTTGCTGAGACATCTCTGCAATATTCGTATTCGCGGAATGATATGAATCTCTCCTATCTTAATCGCTTCTCTGAGCGTCTCGTTGCTCCTCTCTACTCTACAACTCCCATCAGGAGCCACAAGACGGATGGCATTGCTATTGAGGGTCGTAACCTGAATTTCTCGTTCCCCTCAAGGCAGGTGAAAGCCGTCCCAATTCTTCGGGATTGTTCAATTCGCATCCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGATGTGGGAAATCTACCCTCTTAAAGATATTAGCTGGTCTCTTGAATCCTACTTCAGGAACTGTGTACGTGAAGGGGCCCAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGATGTGGCATTTGGTCTTGGCAAGTTCAATCTGACCCGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCAAGCTGTGGGCATGTCTGATTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACCTTCTTAGATGAAAGTGACCAGGTTGGTGTTATCAAAGCAGTTAGGAACTCTCTGGATACCTCTGCAGGGGTTACTGCATTGTGGGTGACCCATCGTTTAGAAGAATTGAACTGTGCTGATGGTGCTGTGTACATGGAGGATGGGAAAGTTGTGATGGTTGGAGATGCTGAAAGAATAAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 858 0.4487 MFISCFVNFVAETSLQYSYSRNDMNLSYLNRFSERLVAPLYSTTPIRSHKTDGIAIEGRNLNFSFPSRQVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTRDEVRSRVSRALQAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNCADGAVYMEDGKVVMVGDAERIKSFIEARQSDYIKQINS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1464 285 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 56 270 - -
Lele24g1464 285 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524|GO:0016887
Lele24g1464 285 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 56 281 IPR003439 GO:0005524
Lele24g1464 285 Gene3D - 51 284 IPR027417 -
Lele24g1464 285 SMART AAA_5 85 248 IPR003593 -
Lele24g1464 285 CDD ABC_cobalt_CbiO_domain1 57 258 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele24g1464 285 FunFam ABC transporter I family member 10 52 282 - -
Lele24g1464 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 272 IPR027417 -
Lele24g1464 285 Pfam ABC transporter 76 208 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1464 Lele-ChrLele24 20525039 20527517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1464 56 284 Calmodulin-binding Proteins AT2G36910 29.032 4.71e-20 88.2