Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1457 ATGGCTACGACGAAATTGTTTCCTGGGTTTCGGTTTCATCCGACTGATGTTGAACTCCTCAGATTCTTTCTGAGGAGGAAGGTTCTGGGTAAGAAATTCCCGAATGATGTGATTGCTGAAGTAGAAATATACAAGTTCGCTCCGTGGGATCTCCCTGATAAATCTTACCTGAGAACTGGAGATTTGAAATGGTACTATTTTTGCCCTAGAGAAAAGAAATATGCCAGTGGGGCAAGAATGAATCGTGCTACGAAAGTTGGGTACTGGAAAACTACTGGGAGGGATAGATCTGTTCATCACAGGAATCAACTTGTGGGAATGATAAAAACCCTCATATTTCACACTGGTAGAGCTCCTAAAGGAGATAGGACTGATTGGGTCATGCATGAATATAGGCTCGAAGATCAGGATCTGACTGATAAAGACATTCCTCAGGATTCCTATGTGCTTTGTAAGGTTTTCCAAAAAGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAGACCGTTCAATGATGATGATTGGGATGGTGATGACGAAATTGATGGTGTAGGATCTCTTCCATTAATTGGCGTGCGTGCCGCACCAATTACCATTCATCCTAATACACCTGGCAGTTCTGTGGCAACTTATAGTCATCCCCCTGCAAGTACATGCGTTGGATCACCACCAGACTCATGTCTTATGCATCCTTCCTTTCCAAGTAATCAAGTTATATCCACTAATGGGTCTCAAGTTCCAGTTGTTGATGATATTGATGCATTGTTGGAGCGCTTCATAGTGAATGACACAGTGGTTATGACTGAAAATAACATTGAGAAGAATGATAATTCTGCTGTGGAGAAGGAAGCTGAAGAAGAACCTTGTGTGGATGGGAATGATATATTTAAGGACTTGGGAGACCTTGACAACACAAATACAAACCAAATGTATCATCATGGTAATGATATATTTAAGGATTTGGGAGACCTCGACGACAATACAAACCAAATGCATGCTGCAGGTAACATGCCATTGATGTTCGATGATGATTTGGATTTCTTGGAGTTGCGTGACCTGGACACCGAGGTCCCTCACCAGACTGAGCCAGAGAGTGGGGACCATTTCATCCAGGAAAAGGAGGGTTAG 1131 0.4279 MATTKLFPGFRFHPTDVELLRFFLRRKVLGKKFPNDVIAEVEIYKFAPWDLPDKSYLRTGDLKWYYFCPREKKYASGARMNRATKVGYWKTTGRDRSVHHRNQLVGMIKTLIFHTGRAPKGDRTDWVMHEYRLEDQDLTDKDIPQDSYVLCKVFQKDGPGPRNGAQYGRPFNDDDWDGDDEIDGVGSLPLIGVRAAPITIHPNTPGSSVATYSHPPASTCVGSPPDSCLMHPSFPSNQVISTNGSQVPVVDDIDALLERFIVNDTVVMTENNIEKNDNSAVEKEAEEEPCVDGNDIFKDLGDLDNTNTNQMYHHGNDIFKDLGDLDDNTNQMHAAGNMPLMFDDDLDFLELRDLDTEVPHQTEPESGDHFIQEKEG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1457 376 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Lele24g1457 376 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Lele24g1457 376 MobiDBLite consensus disorder prediction 354 376 - -
Lele24g1457 376 FunFam Nac domain-containing protein 86 15 159 - -
Lele24g1457 376 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Lele24g1457 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 269 - -
Lele24g1457 376 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1457 Lele-ChrLele24 20460844 20463396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1457 1 362 NAC Transcription Factor Family AT5G09330 42.328 1.52e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g1457 NAM 1.3e-33 No_clan