Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1444 ATGGCTTCTGCTCGGCCGATTTCTTCGACTTCATCTTCAGGTTTTCTCGTTAGTGACATGTTTGAAATCAACTTGGAACGAGAAGGAGAAGGAGAAGGGGAAGAAGGAGAAGGAGAAGTAGAAGAGCTTGGAGCTATGAAGGAGATGATGTACAAGATCGCCGCTCTGCAACCCATCGACATCGACCTTTCCACCATCCAGAAACCTAAGCGGCGGAACGTCAGGATCAGCGACGACCCCCAGAGCGTGGCCGCCCGCCACCGCCGTGAGAGGATCAGCGAGAAAATCCGCATACTCCAAAGACTCGTACCCGGCGGAACCAAGCTCGACACCGCCTCCATGCTGGACGAAGCCATTCGATACGTTAAGTTCTTAAAGAGACAAATCAGGTTGCTCCAATCTCCACAGCACCGCAACAATATTATTATGGGTACGATCACCACTGGTAATAATACTACTCTCGCCGATTGA 471 0.5096 MASARPISSTSSSGFLVSDMFEINLEREGEGEGEEGEGEVEELGAMKEMMYKIAALQPIDIDLSTIQKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKLDTASMLDEAIRYVKFLKRQIRLLQSPQHRNNIIMGTITTGNNTTLAD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1444 156 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 125 IPR011598 GO:0046983
Lele24g1444 156 CDD bHLH_AtIND_like 77 134 - -
Lele24g1444 156 SMART finulus 82 131 IPR011598 GO:0046983
Lele24g1444 156 Gene3D - 79 143 IPR036638 GO:0046983
Lele24g1444 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 140 IPR036638 GO:0046983
Lele24g1444 156 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 27 139 IPR045843 GO:0003700|GO:0006355
Lele24g1444 156 FunFam BHLH transcription factor 79 142 - -
Lele24g1444 156 Pfam Helix-loop-helix DNA-binding domain 86 125 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1444 Lele-ChrLele24 20381305 20381775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1444 45 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 77.528 7.51e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele24g1444 HLH 1.5e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1492 22 20667554 20668228 Lele24g1444 24 20381305 20381775 hybridization