Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1442 ATGACCACTCTTCACAGGAATTCCCACTCCTTTCTTCCGAAATCTTCTTTCCTTCTGTTTTCCATGGCTTCTCTTCTTTCTCTTTCCCTTCTCTCCTTCTTCCTCTTCCTTTGTCTCTCTTCTGCCGCTCGCCACCACCGGAAACCACCCACCACCACCCCCTCTACCTCCTCATCTGTTGTCGTCGAGAACGCCTGCAAGGCCACTCGCTTCCCTGAACAATGCCGATCTTCTCTAACCAAACTCCCTCCCAATCCCACTCCAGTTCAAATCCTCCAATCCGCCTTGTCCGTGTCGTCGGAGAATCTCAAGACGGCGCAATCCATGGTCAAGTCCATCCTCGACTCATCGGCTTCCAGTATCAACCGCTCCACCGCTTGCCAAGTCTGCATGGAGGTGCTCCCTGACTCCGCCTACCGCATCAGTCTGGCCAATGACGCGCTGCCGCGTGGCAGGACCAAGGACGCTCGCGCATGGATGAGCGCCGCCTTGCTCTACCAGTACGATTGCTGGTCGGCTTTGAAGTACGCCAATGACACTAACCAGGTCGGTAAGGCGATGGCCTTCTTGGAATCACTAACCAGGATCTCCAGCAACGCGTTGAGCATGATAGCGTCGTACGACGTCGTCGGGACTGACACCGCGTCCTGGAGGCCACCTATAACGGAGCGCGATGGGTTCTGGGAAGGATCCGGGTCGGGTTCTGGGTCTTTGGGTTTCAGGGGTGGGTTACCGGCGAAAGTGAATCCGGATGTTACAGTGTGTAAGGACAGAGGGAATGGGTGTTACAAGACGGTGCAGGAGGCTGTTAACGCCGCTCCGGATAACGCTGGCAACAAGAAATTTGTTATATACATTAAGGAAGGTGTTTATGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAATTTGGTGTTTTATGGCGACGGAATAGGGAAGACCGTCATCACAGGGTCTGCTCAGGCCGATCAACCCGGAATGACGACATACCTTTCAGCTACCGTTGCCGTTCTGGGTGATGGATTCATGGCCAAGGGTCTTACAATCCAGAACACAGCAGGCCCTGTTGCTCATCAAGCAGTGGCCTTAAGATCAGACAGCGATTTCTCGGTGTATGAAGAATGCGAATTCATAGGCAATCAAGACACACTCTATGCTCATTCCCTTCGTCAATTCTACAAATCATGCCGCATCCTGGGCAACGTAGACTTCATCTTTGGGAACTCCGCTTCCATCTTCCAAGATTGCCAAATCCTAGTCCGGCCCCGGCAAGTGAAGCCGGAGAGCGGCGAGAACAATGCAGTCACTGCACATGGCAGAACAGACCCTGCCCAAACCACTGGCTTTGTTTTCATGAACTGCTTGATCAATGGGACCAAGGAGTACATGGATTTGTACCATAGCAAGCCTCAGAAGCACAAGAACTACTTGGGGAGGCCATGGAAGGAGTACTCAAGAACAGTGTTCATTAACTCATTCTTAGAAGCTCTGATAACTCCCACGGGGTGGATGCCATGGAGGGGTCAATTTGCACTGAAGACACTTTACTATGGAGAATATGCCAACACAGGACCTGGTTCTGATCTGAGTCAGAGAGTTCCGTGGAGTAGCAAGGTCCCACCTGAACACTTGTCTGCATATTCAGTTCAGAATTTCATCCAAGGAGATGAGTGGATTTCTTCATCCATGATTAGCTCTTTAGATTTGTCATAG 1713 0.5143 MTTLHRNSHSFLPKSSFLLFSMASLLSLSLLSFFLFLCLSSAARHHRKPPTTTPSTSSSVVVENACKATRFPEQCRSSLTKLPPNPTPVQILQSALSVSSENLKTAQSMVKSILDSSASSINRSTACQVCMEVLPDSAYRISLANDALPRGRTKDARAWMSAALLYQYDCWSALKYANDTNQVGKAMAFLESLTRISSNALSMIASYDVVGTDTASWRPPITERDGFWEGSGSGSGSLGFRGGLPAKVNPDVTVCKDRGNGCYKTVQEAVNAAPDNAGNKKFVIYIKEGVYEETVRVPLEKKNLVFYGDGIGKTVITGSAQADQPGMTTYLSATVAVLGDGFMAKGLTIQNTAGPVAHQAVALRSDSDFSVYEECEFIGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQTTGFVFMNCLINGTKEYMDLYHSKPQKHKNYLGRPWKEYSRTVFINSFLEALITPTGWMPWRGQFALKTLYYGEYANTGPGSDLSQRVPWSSKVPPEHLSAYSVQNFIQGDEWISSSMISSLDLS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1442 570 Gene3D - 245 567 IPR012334 -
Lele24g1442 570 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 205 IPR006501 GO:0004857
Lele24g1442 570 CDD PMEI-like_3 65 208 - -
Lele24g1442 570 FunFam Probable pectinesterase/pectinesterase inhibitor 51 60 206 - -
Lele24g1442 570 Pfam Plant invertase/pectin methylesterase inhibitor 62 203 IPR006501 GO:0004857
Lele24g1442 570 Pfam Pectinesterase 251 556 IPR000070 GO:0030599|GO:0042545
Lele24g1442 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 207 IPR035513 -
Lele24g1442 570 SUPERFAMILY Pectin lyase-like 249 564 IPR011050 -
Lele24g1442 570 SMART PMEI_2 57 203 IPR006501 GO:0004857
Lele24g1442 570 FunFam Pectinesterase 245 568 - -
Lele24g1442 570 PANTHER PECTINESTERASE 39 560 - -
Lele24g1442 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1442 Lele-ChrLele24 20365360 20367552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1442 54 562 Carbohydrate Esterase AT5G09760 65.243 0.0 710