Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1431 ATGCAATTATCATACATTGTGAATTTTGAATTGTTTCTTATTCAATGCACCATGTTCACCGTAAAATTTGTCCCAATGAGTGTGGCGAGGACAAGAAGCTCAGAGGAGTGTATTGGGCGTGCAAAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTTAAGACATGTTATAAGGCGTTCGATGAAGTCAGTGGATTAGAAGTGGCCTGGAACCAGGTTCAGATTGATGAGGTGCTACAGTCACCAGGTGACTTGGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTTAACATCATTACCGAGTTGTTCTCCTCGGGTAGCCTCAGACAGTATCGTAGGAAGCACAAGAAATTTGACATGAAGGCCGTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTATCTCCATAGCCACAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATTAATGGAAACCAAGGTGAAGTTAAAATTGGCGATCTGGGGCTCGCAACTTTCTTGGAACGGGCTAATGCTGAGAGTGTAATTGGAACCCCTGAGTTTATGGCACCAGAGCTGTATGATGAAAATTATAATGAATTGGCTGACGTATATTCATTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCTCTTTCTAAAGTCAAAGATCCAGAGATGAAATTATTTATTGAGAAATGTCTAGTCCCAGCTTCCCAAAGAATGTCATCAAAGGATCTTTTGATGGACCCTTTTCTTCAAATTAATAGTTTGGCAAGACATCGTCGTCTATCATTACCAGATATTGTTATACCTAAATGTGGAGCCTTTGGAGATCGTATTCTTGTGTCAGAAGGTCCTGCTACTCATCGTAATGGAACAAATTTTGTAGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCTAGTGAAACTTCACGTTCTCCATGTGTTGAGATACGAAAGTTGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAGAAAATGATGAGAATTCTGTATCAATAGGTGTCCGGATAGCTGATCAAGGCGGTCGAGCGAGAAATATTCACTTCCTATTCTACCTTGATAGTGATACTGCTAGTTCTGTTTCTAGTGAGATGGTTGAGCAACTTGAACTTCCAGATCAAAATGTAAAATTTATAGCTGAGCTGATGGACTTGTTATTGGTTAATTTGATTCCCAAGTGGAAACCTTGTGTAGATATTGCTCATTTGGCTTTGCGAAGTTGTAAAAGAACTATGGCTGGACAAAAAGATTTGGAATCTGCAAAACAAAAACAACCTTCTGAAGATTCTATGCATAATATTACTCAAGAGAAAGGTATCTCACACTCGATTGGAGGGTCAGGTGCATTAGAAAACCATCATTATCCTAACTTGGATGAATTTTTATCCCAAGCCAACATAGATGGAAATACAATTAGAGTAGATGATTTGTGTTCTGAATTTTCACGTGCTTCTATAACATCTGAAATAAACGATAGGAAGTTATCTTTAGTTTCATTCTTATCTGCGGATTCAGCATTTCATGACTTCAACTTGCCCAGAGTACCAGGAGGAACTGAATGCTCTTTTGTATCTATAATGGAAGCATGTCCTGATTATGTTAGGAGTAAGAATTCAGAATCAGGAAGTCATGATATGTTGAACTTCCCAACCCATTCTAATAATGTGTCTTCTCTATCTAATGTAGAAGATGGGTTAAAAATAGAGTTAGATATGATTGAACAGAAATACCTCGAGACAATTAAAGAAGCATCGAGAATAAGATCTGAAGCTATCATGGAAGTCCGAAGAAGATCATCACAGAAGAAGATTCAATCATAA 2052 0.3777 MQLSYIVNFELFLIQCTMFTVKFVPMSVARTRSSEECIGRAKPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYKAFDEVSGLEVAWNQVQIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQYRRKHKKFDMKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERANAESVIGTPEFMAPELYDENYNELADVYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPASQRMSSKDLLMDPFLQINSLARHRRLSLPDIVIPKCGAFGDRILVSEGPATHRNGTNFVDLDETCELPVITIYDGSSETSRSPCVEIRKLKRGDIFTLKGEENDENSVSIGVRIADQGGRARNIHFLFYLDSDTASSVSSEMVEQLELPDQNVKFIAELMDLLLVNLIPKWKPCVDIAHLALRSCKRTMAGQKDLESAKQKQPSEDSMHNITQEKGISHSIGGSGALENHHYPNLDEFLSQANIDGNTIRVDDLCSEFSRASITSEINDRKLSLVSFLSADSAFHDFNLPRVPGGTECSFVSIMEACPDYVRSKNSESGSHDMLNFPTHSNNVSSLSNVEDGLKIELDMIEQKYLETIKEASRIRSEAIMEVRRRSSQKKIQS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1431 683 SUPERFAMILY Protein kinase-like (PK-like) 60 350 IPR011009 -
Lele24g1431 683 Gene3D Phosphorylase Kinase; domain 1 44 139 - -
Lele24g1431 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Lele24g1431 683 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 44 678 - -
Lele24g1431 683 Gene3D Transferase(Phosphotransferase) domain 1 141 321 - -
Lele24g1431 683 Pfam Protein kinase domain 61 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1431 683 SMART serkin_6 58 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1431 683 ProSiteProfiles Protein kinase domain profile. 58 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1431 683 FunFam probable serine/threonine-protein kinase WNK9 141 320 - -
Lele24g1431 683 CDD STKc_WNK 56 315 - -
Lele24g1431 683 FunFam Probable serine/threonine-protein kinase WNK1 43 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1431 Lele-ChrLele24 20264190 20268014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1431 158 521 MAP Kinase Kinase Kinase AT1G49160 64.850 1.04e-165 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele24g1431 Pkinase 1.5e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1491 21 23206455 23208944 Lele24g1431 24 20264190 20268014 hybridization
Lele22g1479 22 20551009 20553971 Lele24g1431 24 20264190 20268014 hybridization