Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1418 ATGTTTCCAAATTCCCAATCCCTTCAGACTTCAGACTCAAAAGCTTTTGGTTTAATGGCCGCTAAGCTAGTTCACCCATCAATGGCTGATTCCCATCTTAACCCTCTCATTTGCAGAACCATGAACACCACCAAGCTCCAACGATATGCCACACATAGCCCTTGTTCAAAACCAAACACTTCATTATCATCAATATTTGCAGACACCTCTTATGGATTCTTCAGACCCGCCACTATCACAAAAGTTGCAGAACACAGCTCTGGTTTGCTTAGTGATGAAGAACTTTCCTCCAGCAAATCTGCACTTTATGAAGCTGTTCAAGGGATTGACAGGGGAATTTTTGGAATCAATTCTAGGAAGAAGTCTGAGATTGAAACTCTAGTGAAGGAGCTAGAATCTCTGAATCCAACTCCAGATCCTACTCAATTTGGACAAGGCCTCACAGATTTCATCTCATTGGATGATTTCTTCCAGATTATTGATGTAGCCGAGAGAGTTGTCATTAATTTCGAGAACTCCACTATCACTCCAGACCAGATGCTACAGAATTCGAGTTTACCTGGAAACTCCATTCACCAGCGGAGTCACACGGAGGAGGGTGGTGGCGAGCCTTTCTCTCACGGACACCAAGACGAACAGAAGGACCAAGGAAAGTCGTTATGGCCGACTCAACGGCAAGACTTCTTTGAGCTGTTAGAACCTCCTACGAACTCTCCTTGCCCTGAAAATAGTGAAGAACAAGCGAGAAGCACAGCCACAATCACAAACCCAACGGTTTTGTCTAATGTTATTCAAGGTGCAACTCAACATCCTTACCCCGAAAAGAATGAAGAACAAGTGGAAAACATAGCAACAACTACAACCCCAATGGATTTGTCCAATGTTATTCAAGATTCAATTCCACATTCCATTCGATTCTCTGGTGACGCCTCTGGTTCAGCTACTCTCTCTTCGAGCGAAGAATCAGAGGAAGATATTCGAAAGAAGAAAAGGAAACTGACGCAGTATTTTGGGAGGTCGACGAACAAAGTAGTAGAGAAGCAAGCGAAGCTATATAAGAACTTTATGGAGGTGTTACTCAAATGTGAACAAGATAGAATGGCAAGAGAGGAAGCATGGAAGATGCAAGTCGCAGGACAAACAGGGACCATAGAATTACCTGAGAACCTACTTCCAAATGATTTAGATAAGGCCCAGCAAGAAAATGACAATGCAGGTATTAGTTTTATTGAAAAGCAAGAATGTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTCCTCTAGATGGCCCAAAGATGAAGTGGAAGCTTTGGTTAGAGTGAGGATAAACTTTGCTGGGGAGAATGAAGGAAATGGGCTTAAAGGGTCTATTCCTATATGGGAGGCGATATCTAATGCAATTAAAAAACTTGGTGAAAAGCCTAATGAGAAGGTGGAGGATTTAGTCAGTTCTGATAAGGATCAACTGCAGCCTGAAGAGCTACTAATGCATCTTATGGTTGTTGTTTGGTTGGAGGTGGTGGTTGTAATATGGAGGGGTCAAATTTGA 1554 0.4266 MFPNSQSLQTSDSKAFGLMAAKLVHPSMADSHLNPLICRTMNTTKLQRYATHSPCSKPNTSLSSIFADTSYGFFRPATITKVAEHSSGLLSDEELSSSKSALYEAVQGIDRGIFGINSRKKSEIETLVKELESLNPTPDPTQFGQGLTDFISLDDFFQIIDVAERVVINFENSTITPDQMLQNSSLPGNSIHQRSHTEEGGGEPFSHGHQDEQKDQGKSLWPTQRQDFFELLEPPTNSPCPENSEEQARSTATITNPTVLSNVIQGATQHPYPEKNEEQVENIATTTTPMDLSNVIQDSIPHSIRFSGDASGSATLSSSEESEEDIRKKKRKLTQYFGRSTNKVVEKQAKLYKNFMEVLLKCEQDRMAREEAWKMQVAGQTGTIELPENLLPNDLDKAQQENDNAGISFIEKQECRNGGNFTLTSPSSSRWPKDEVEALVRVRINFAGENEGNGLKGSIPIWEAISNAIKKLGEKPNEKVEDLVSSDKDQLQPEELLMHLMVVVWLEVVVVIWRGQI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1418 517 MobiDBLite consensus disorder prediction 178 195 - -
Lele24g1418 517 MobiDBLite consensus disorder prediction 303 319 - -
Lele24g1418 517 PANTHER FI21293P1 223 477 - -
Lele24g1418 517 MobiDBLite consensus disorder prediction 196 218 - -
Lele24g1418 517 Pfam PAP_fibrillin 98 142 IPR006843 -
Lele24g1418 517 MobiDBLite consensus disorder prediction 303 328 - -
Lele24g1418 517 MobiDBLite consensus disorder prediction 178 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1418 Lele-ChrLele24 20188093 20193951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1418 205 473 Trihelix Transcription Factor Family AT1G76890 28.367 2.62e-19 89.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1480 21 23142661 23144095 Lele24g1418 24 20188093 20193951 hybridization
Lele22g1469 22 20475224 20479854 Lele24g1418 24 20188093 20193951 hybridization