Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele24g1415 | ATGATAAGGTTATCCTCAGCCATTGTAAGATGGTGTAGTAGAGCATCATCAGAACCTACTGTTTCAAGAGCTGTGTGGAACCTCTTCACGGTCGTTTTCATTAGTCTTACAACTTTAGATTTAGTGTTCGGGAACAGTTATATGGATTTGGACGATTTCCGATCAATATTGGAGTCGGCTGGTGTGGATGTATGGATGTTCATCGACACTGCAATCGACGTGGCTTCCATTGAGTACAACAACGAGTTAAAGCGTCGAAGGGATGGAATCGTTCAGCGTCTCTACGAAGCCACTTCAGCTCCGGGACGGTGTCGGAACTGCGAAGCGATTGGGCTCGAGTCCAATGGCCAGGAAATAAGCTCACCAATTGAGAAACAGAGCACTCCTGAGCTGAAAAGAGATGCCTCGCCTGTAACGCCTCACTCTATCGGTCAAGATTACGACGATTTAGATCCTTATGGAGGTCTTCTTGATGATGAACAAAAGAAGATTCAAGAGATCAAAGAGCAACTTGAGGATCCTGACCAGCCTGAAGATTATGTGGTGGAGTTGCTACAAATTCTAGCGGACATGGATATTACATTCCAAGCACTAAAGGAGACGGATATTGGGAGGCACGTTAATAGGTTGCGCAAGCATCCATCCAATGATGTTCGGAGATTGGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGATGAATGGGTGAAGGTAAATCAACCAGGCGATGTTGCTTCTGCCGTCATGGCTAATGGAGATTCTTCGCCTATGCAGAAAAACGCCCAAAACGGGCACAGCCAGGTTCCTGATTTTGCATACTCGCCTAATCCGCACTATGGGAGTTCTGGGTCAGAGCGAAACTATTCAGAAGCTGAACCAAAGTCAAAGACAGTTTCTCAAAGAGCGCCACCAAAACCAGCAACCCCAGTGCCCATTCCTGCTCCTCAAAACGTATGA | 960 | 0.4635 | MIRLSSAIVRWCSRASSEPTVSRAVWNLFTVVFISLTTLDLVFGNSYMDLDDFRSILESAGVDVWMFIDTAIDVASIEYNNELKRRRDGIVQRLYEATSAPGRCRNCEAIGLESNGQEISSPIEKQSTPELKRDASPVTPHSIGQDYDDLDPYGGLLDDEQKKIQEIKEQLEDPDQPEDYVVELLQILADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKVNQPGDVASAVMANGDSSPMQKNAQNGHSQVPDFAYSPNPHYGSSGSERNYSEAEPKSKTVSQRAPPKPATPVPIPAPQNV | 319 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele24g1415 | 319 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 157 | 244 | IPR035441 | - | |
Lele24g1415 | 319 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 162 | 241 | IPR035441 | - | |
Lele24g1415 | 319 | SMART | TFS2_5 | 164 | 235 | IPR003617 | GO:0005634 | |
Lele24g1415 | 319 | MobiDBLite | consensus disorder prediction | 278 | 297 | - | - | |
Lele24g1415 | 319 | MobiDBLite | consensus disorder prediction | 248 | 319 | - | - | |
Lele24g1415 | 319 | MobiDBLite | consensus disorder prediction | 115 | 146 | - | - | |
Lele24g1415 | 319 | Pfam | TFIIS helical bundle-like domain | 184 | 233 | IPR017923 | - | |
Lele24g1415 | 319 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED | 48 | 310 | IPR044790 | - | |
Lele24g1415 | 319 | MobiDBLite | consensus disorder prediction | 305 | 319 | - | - | |
Lele24g1415 | 319 | CDD | TFIIS_I | 161 | 234 | - | - | |
Lele24g1415 | 319 | MobiDBLite | consensus disorder prediction | 252 | 271 | - | - | |
Lele24g1415 | 319 | ProSiteProfiles | TFIIS N-terminal domain profile. | 159 | 236 | IPR017923 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele24g1415 | Lele-ChrLele24 | 20159534 | 20162336 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Lele24g1415 | Med26 | 3e-12 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele21g1474 | 21 | 23117785 | 23119722 | Lele24g1415 | 24 | 20159534 | 20162336 | hybridization | |
Lele22g1463 | 22 | 20448178 | 20450152 | Lele24g1415 | 24 | 20159534 | 20162336 | hybridization |