Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1402 ATGAAACCCAAGGCCCTCGCTAGCTATCACTTCTCTTTCTTCATATTCTTCTCCCTCGCCGTTCTTTCTCCCCAATCTTCAGGTTCATCCTCTGCTTTTTCTGCTTTCATAGATTCCCCTCAACAATTGATCGACTTCAAGTCTTCTCTTCCAGACCAATCCCTACTCAGAAACTGGCTTCCAAACCAAAACCCATGTTCTTTCACTGGGATTTCCTGCAAGCAAACCGGGGTTTATTCCATAGACCTCAGCTTCATCCCCTTGACCACAAACTTAAGTGTTGTCTCTGCCAATCTTCTCTCACTCAACCACCTGGAAGCTCTGAACCTCAAGCACACCAATCTCACTGGTAGCATTTCTGTGATATCACATGCGGCCTTCAAGTGTGGTGCCTCATTGAGCAGTATAGATCTATCTCAGAACAGTTTGTCTGGTTCTGTCTCTGACATATCCTATCTCGGCTCCTGTTCAAGTTTGAAATCTCTCAACCTTTCGAATAATGCTTTCGAGTTTTCGGGGAAAGATTCCACCGGCTTGAGACTCAATCTCCAAGTCCTGGATATCTCTCTGAATAATGGTATTTCTGGTCCAAATGTTCTCCGTTGGATCTTATCTGCAGGTTGCGACGATATGCAAGTGTTGGCACTGAGAGGGAACAAAATCACCGGAGAAATTAATTTCTCGAACTGCCAGAAGTTGCAGCATTTGGACCTTGCTGCTAATAATTTCTCTGTCGCTATTCCTTCCTTCGGCGAATGTTCGGCGTTAGAGTACCTGGATATCTCCGCTAACAAATATTTCGGCGACATTGGCCTCGCTCTCTCTTCCTGCAAGAAGCTCAGTCACCTCAACGTTTCACACAACGAGTTCTCCAGTCCGGTTCCGTCACTTCCTGTGGACTCTCTGCAGTTCCTTTATCTCGCAGGCAACAACTTCCACGGTCAGATTCCAGAACGACTGGCGGATTTGTGCACCACTCTCATCGAGCTCAATCTTTCCTTGAACTCCCTCTCCGGTACGATTCCGCACGGTTTTAGCGACTGCTCTTTGCTGGAATTGTTTGATATATCCAACAATGATTTTTCCGGGGAGTTACCGATTGAAATTTTCATGGACATGAGCGGCTTGAAGAAGCTAGTTCTTTCATTCAACGATTTCGGCGGTAATTTGCCGGATAATCTGTCGAAGCTCACCAGCTTGGAATCGTTGGATTTGAGTTCCAATAACTTCTCAGGGTCAATACCTGGAGGGCTTTGTCAAGATCCTAGGAACAATTTGAAAGAACTGTATCTGCAGAATAATATGCTCACGGGTTTCATTCCACCAACACTCAGCAACTGTTCTCAGCTTGTTTCATTGGATTTAAGCGTCAACTTCCTGAAGGGGACTATCCCTTTCAGTTTTGGGTCTCTTTCGAAGCTTCGTGATTTGATTATGTGGCTAAATAAGCTTGAGGGCGAAATACCACAAGAGCTTATGTTCATAAAGACCCTTGAGAATTTGCTTTTGGACTTCAATGAGCTCACAGGGAACATTCCTTCTGGTTTAAGAAACTGCACCAATTTGAATTGGATCTCCTTGTCTAATAACAGATTGAGCGGGGAGATTCCTGCTTGGATTGGTCAGCTTTCCAATCTCGCAATCCTGAAACTGAGCAATAACTCATTCTCCGGGAGGATTCCACCGGAACTCGGTGATTGTCGCAGCTTGATATGGTTGGATCTAAATACAAATTCCTTCAATGGGTCAATTCCTCCTGAATTGCTCAAGCAATCTGGCAAAATCTCTGTGGATTTCATTCGTGGGAAAACTTATGTGTATATCAAGAATGATGGCAGCGAGGCATGCCATGGTGCTGGGAATTTACTAGAGTTCGCGGGGATCAGTCCGAGGCAGTTGAACAGAATTTCAACAAGGAATCCCTGCAACTTCACTAGAGTTTATAGGGGTAATCTCCAACCTACGTTTAGTAATAATGGTTCTATGATTTTCTTGGATCTTTCATACAATATGTTATCGGGTAGCATACCGAAGGAGATTGGGAGCTTGTACTATGTAGACATTCTGAATTTGGGTCACAACAACTTGTCTGGAAATATTCCAGAAGAGCTTGGGAAGGCAATAAAACTGGACATACTTGATCTCTCGTGGAATAGGCTTGAAGGACAGATTCCACAGTCCTTGACCAGCCTTTCGATGCTCTCTGAAATTGATCTGTCAAACAACTTTCTAACAGGAGTGATTCCTGACTCTGCTCAATTTGTAACCTTTTCTCCCAACAGTTTCTTGAATAATTCTGGTCTCTGCGGATACCCTCTTACTCAATGTGGGTCACAGAAAGGATTAGGTTCAGATGCTCAACATCAGAAATCTCGCCGGAGGCAAGCATCTCTTGCAGGTAGTTTGGCTATGGGATTGTTGGTCTCCCTCTTCTGCATCTTTGGTGTGATTATAATTGCCTTAGAGACCAGAAAGAGGAGAAAAAAGAAGGAAGCTACCCTAGATGCCTACATGGAGAACAATTCTCATTCAGGTACAGCTAACAATACGAGCTGGAAGCTTACGAGTGCCCGTGAAGCACTTAGCATAAACCTTTCAGCATTCGAGAAGCCCATCCGGAAACTTACTTTTGCAGATCTCCTTGAAGCTACCAACGGCTTTCACAATGACAGTCTTATTGGCTCTGGCGGTTTTGGTGATGTCTACAAGGCACAACTGAAGGATGGAAGTGTTGTGGCTATCAAGAAACTAATACATATCAGTGGTCAAGGTGACAGGGAATTCACAGCTGAAATGGAAACCATTGGTAAAATCAAGCATCGCAACCTAGTTCCTCTTCTGGGTTATTGCAAGGTTGGGGAAGAAAGGCTCCTGGTTTATGAATTCATGAAATACGGAAAGCTCTTGAAAGAGGATCCTAGTCTTGAGGTTGAGCTTCAACAACACTTGAAAGTTGCTTGTGCTTGTTTGGATGATCGCCCATGGCGGCGTCCCACGATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAAGCTGGGTCTGGCATTGATTCTCAATCCACCATAGACACCGAAGATACAGCTTCAGTTCAGTGGTTGTTACCATTTTGTTTCTCAAAAAGTTCAGATGATCCTGAAAGGGGATTGTTGCGTCTAGCGTACCCCCTTGATGGTGACTAA 3180 0.4437 MKPKALASYHFSFFIFFSLAVLSPQSSGSSSAFSAFIDSPQQLIDFKSSLPDQSLLRNWLPNQNPCSFTGISCKQTGVYSIDLSFIPLTTNLSVVSANLLSLNHLEALNLKHTNLTGSISVISHAAFKCGASLSSIDLSQNSLSGSVSDISYLGSCSSLKSLNLSNNAFEFSGKDSTGLRLNLQVLDISLNNGISGPNVLRWILSAGCDDMQVLALRGNKITGEINFSNCQKLQHLDLAANNFSVAIPSFGECSALEYLDISANKYFGDIGLALSSCKKLSHLNVSHNEFSSPVPSLPVDSLQFLYLAGNNFHGQIPERLADLCTTLIELNLSLNSLSGTIPHGFSDCSLLELFDISNNDFSGELPIEIFMDMSGLKKLVLSFNDFGGNLPDNLSKLTSLESLDLSSNNFSGSIPGGLCQDPRNNLKELYLQNNMLTGFIPPTLSNCSQLVSLDLSVNFLKGTIPFSFGSLSKLRDLIMWLNKLEGEIPQELMFIKTLENLLLDFNELTGNIPSGLRNCTNLNWISLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNSFNGSIPPELLKQSGKISVDFIRGKTYVYIKNDGSEACHGAGNLLEFAGISPRQLNRISTRNPCNFTRVYRGNLQPTFSNNGSMIFLDLSYNMLSGSIPKEIGSLYYVDILNLGHNNLSGNIPEELGKAIKLDILDLSWNRLEGQIPQSLTSLSMLSEIDLSNNFLTGVIPDSAQFVTFSPNSFLNNSGLCGYPLTQCGSQKGLGSDAQHQKSRRRQASLAGSLAMGLLVSLFCIFGVIIIALETRKRRKKKEATLDAYMENNSHSGTANNTSWKLTSAREALSINLSAFEKPIRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEFMKYGKLLKEDPSLEVELQQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIDTEDTASVQWLLPFCFSKSSDDPERGLLRLAYPLDGD 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1402 1059 ProSiteProfiles Protein kinase domain profile. 887 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1402 1059 SUPERFAMILY RNI-like 301 588 - -
Lele24g1402 1059 Pfam Leucine rich repeat N-terminal domain 41 73 IPR013210 -
Lele24g1402 1059 Pfam Leucine Rich Repeat 734 754 IPR001611 GO:0005515
Lele24g1402 1059 Pfam Leucine Rich Repeat 425 447 IPR001611 GO:0005515
Lele24g1402 1059 Pfam Protein tyrosine and serine/threonine kinase 890 970 IPR001245 GO:0004672|GO:0006468
Lele24g1402 1059 Gene3D Ribonuclease Inhibitor 43 776 IPR032675 -
Lele24g1402 1059 FunFam serine/threonine-protein kinase BRI1-like 2 848 962 - -
Lele24g1402 1059 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 424 601 - -
Lele24g1402 1059 Gene3D Phosphorylase Kinase; domain 1 847 962 - -
Lele24g1402 1059 SUPERFAMILY Protein kinase-like (PK-like) 871 970 IPR011009 -
Lele24g1402 1059 SMART LRR_typ_2 397 421 IPR003591 -
Lele24g1402 1059 SMART LRR_typ_2 543 567 IPR003591 -
Lele24g1402 1059 SMART LRR_typ_2 731 754 IPR003591 -
Lele24g1402 1059 SMART LRR_typ_2 299 323 IPR003591 -
Lele24g1402 1059 SMART LRR_typ_2 102 129 IPR003591 -
Lele24g1402 1059 SMART LRR_typ_2 425 447 IPR003591 -
Lele24g1402 1059 SUPERFAMILY L domain-like 654 774 - -
Lele24g1402 1059 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 206 423 - -
Lele24g1402 1059 ProSitePatterns Protein kinases ATP-binding region signature. 893 916 IPR017441 GO:0005524
Lele24g1402 1059 Pfam Brassinosteroid receptor island domain 593 657 IPR045381 -
Lele24g1402 1059 Gene3D - 598 658 - -
Lele24g1402 1059 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 654 776 - -
Lele24g1402 1059 PRINTS Leucine-rich repeat signature 397 410 - -
Lele24g1402 1059 PRINTS Leucine-rich repeat signature 133 146 - -
Lele24g1402 1059 SUPERFAMILY L domain-like 61 362 - -
Lele24g1402 1059 FunFam Serine/threonine-protein kinase BRI1-like 1 600 657 - -
Lele24g1402 1059 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 376 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1402 Lele-ChrLele24 20041734 20045675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1402 25 968 Receptor kinase-like Gene Family AT4G39400 64.564 0.0 1139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lele24g1402 PK_Tyr_Ser-Thr 5.5e-13 CL0016