Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1401 ATGTCAACGACGTCGTCTCATCAGGCGATTATGAACCAGCAGAGCTTGTTTTATCATCATCAGCAAGATCAGATGGGGCTGCTTTCTTCTTTCCCTGTAAACTTGGGCTTCAATAATTTCCAATCTTCTTCCATGGGTCATCAATTACCAGCTTTGAAATCCTTCAGTGACTTATCTGTTTCAGCTCCTTCATCGCTTGCAATATCTGAAGCAGTTTCTTCTGCAACTCCAAATCTAACACCTGAAACCCATATCTGTTTCACACCTCATCATAATAATAAGCCAATCAGAGAAGAAGACATCACTCAACTCCTTTCCCTCCATAGATCCACTCTAATTAATCCATGGGCATGGGGATTAGAAGAGAGTGAGTGTAAGCGATCAAGTGAAGGAGAAGTTCATCATAACCGTCATCATCAACAACTAGTTGGGGTTTCAGCGATGAAGATGAAGAGATCAATGAAGGGAAGAAGGAAGGTGAGAGAACCCAGGTTTTGCTTCAAGACCCTCAGCGATGTCGATGTCTTGGACGATGGCTATAAGTGGAGGAAGTACGGCCAAAAAGTTGTCAAGAACACTCATCATCCCAGGAGCTACTATCGTTGCACACAAGACAACTGTAGGGTGAAAAAGAGGGTGGAGAGGTTAGCAGAGGATCCGAGGATGGTGATAACAACGTACGAAGGGAGGCATGCTCACTCTCCTTTCAACGATCTTGAAGATTCTCAGATTCATTCTTCTCAGCTTACCAGTTTTTTGTGGTAG 765 0.4366 MSTTSSHQAIMNQQSLFYHHQQDQMGLLSSFPVNLGFNNFQSSSMGHQLPALKSFSDLSVSAPSSLAISEAVSSATPNLTPETHICFTPHHNNKPIREEDITQLLSLHRSTLINPWAWGLEESECKRSSEGEVHHNRHHQQLVGVSAMKMKRSMKGRRKVREPRFCFKTLSDVDVLDDGYKWRKYGQKVVKNTHHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPFNDLEDSQIHSSQLTSFLW 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1401 254 Gene3D WRKY domain 163 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g1401 254 Pfam WRKY DNA -binding domain 177 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g1401 254 SUPERFAMILY WRKY DNA-binding domain 169 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g1401 254 SMART WRKY_cls 176 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g1401 254 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 82 237 IPR044810 GO:0003700
Lele24g1401 254 FunFam WRKY transcription factor 57 162 235 - -
Lele24g1401 254 ProSiteProfiles WRKY domain profile. 171 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1401 Lele-ChrLele24 20027410 20029333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1401 112 254 WRKY Transcription Factor Family AT4G39410 55.249 4.30e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele24g1401 WRKY 1.8e-24 CL0274