LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele24g1392	ATGGACTACAGCTTCTACTTTGAAAACCCTAATCCAAACCCTAATCATGGCGTCGTGAACATGGAGATGGTAGCTTCATCACCATCTGAGTACATATTATCCGATGATTACCTCATGTTCGAAGATGTTGCAGAAGATCATCATCCTCAAGAATATTGGTCACAGAGCACAGAATCATCGGAGAAGACGAACACTGAGTTTAGTACTGAATGCGAAAATGGTGGTGGGGTAAAGAGAAACAAAGAAGAAGCGAGTCAGAGGATTGCTTTTAAGACAAGATCAGAGCTTGATGTTATGGATGATGGATATAAATGGAGGAAATATGGAAAGAAGTATGTGAAGAGTAATCCAAATCCCAGGAACTACTACAAGTGTGCAAATGGAGGATGCAAAGTGAAGAAGAGAGTAGAAAGGGACACAGAGGATGTGAGCTATGTGATCACAACTTATGATGGGGTTCACAACCATGAGAGCCCCTCTTCTGCTTACTACTCCCAAATGCTTTATATTCCTAATTATAATTCCCATTCCTCTACTTCTGCTAACTCTTCCTCCACTACTACTTCCTAG	570	0.4105	MDYSFYFENPNPNPNHGVVNMEMVASSPSEYILSDDYLMFEDVAEDHHPQEYWSQSTESSEKTNTEFSTECENGGGVKRNKEEASQRIAFKTRSELDVMDDGYKWRKYGKKYVKSNPNPRNYYKCANGGCKVKKRVERDTEDVSYVITTYDGVHNHESPSSAYYSQMLYIPNYNSHSSTSANSSSTTTS	189

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele24g1392	189	MobiDBLite	consensus disorder prediction	53	71	-	-
	Lele24g1392	189	MobiDBLite	consensus disorder prediction	49	83	-	-
	Lele24g1392	189	SUPERFAMILY	WRKY DNA-binding domain	92	159	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele24g1392	189	FunFam	WRKY transcription factor 57	85	159	-	-
	Lele24g1392	189	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	11	183	IPR044810	GO:0003700
	Lele24g1392	189	SMART	WRKY_cls	99	158	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele24g1392	189	ProSiteProfiles	WRKY domain profile.	94	159	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele24g1392	189	Gene3D	WRKY domain	83	160	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele24g1392	189	Pfam	WRKY DNA -binding domain	100	157	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele24g1392	Lele-ChrLele24	19920203	19922325	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele24g1392	82	177	WRKY Transcription Factor Family	AT5G64810	63.636	2.78e-42	139

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele24g1392		WRKY	1.7e-21	CL0274