Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1369 ATGGGTGAGTCAAATCAAGTTCACCAAACCTTCCTTGCGCCATTTTTTCCAAGCAGAAGGAATTCCTTACATGAAGCCATGATGGCTCTCTCTGAGATCTTCTCTCAACTTTGCACCAAGGCCATAGTTCTGTTGGCTCTGCTTCTGATACAACTCATGCTCCTTATAAAGAAGCTCAGGTCAGATGCTCGTTCAGTTACAACCACTCAATATCTCAAACTCATCGAGCAGAAGAATCCCACGATTTGTTTCACCAAGAGATTGAGGCAAGAAGATGCAGAGTGCAGGGTGTGCTTATCTGAATTCCAGGAAGGGGAAAAGGTGAGGAACTTGAAATGCAAACACACATTTCACAGAGATTGCTTGGACAAATGGTTGCGGCAATATTGGGCTACCTGCCCTCTTTGCAGGAACCAAGTTCTTCCAGATGATGTTGTGGCCAAGTATCGTGAGCTCCAGAATCAGGTAGAATCTGATGGGAACGATGAGCAGATTATGTTCTTGCTATCCGCGTTAAGTGGAGGAAGTTCTTTGCATAGATTCCTTTAG 549 0.4463 MGESNQVHQTFLAPFFPSRRNSLHEAMMALSEIFSQLCTKAIVLLALLLIQLMLLIKKLRSDARSVTTTQYLKLIEQKNPTICFTKRLRQEDAECRVCLSEFQEGEKVRNLKCKHTFHRDCLDKWLRQYWATCPLCRNQVLPDDVVAKYRELQNQVESDGNDEQIMFLLSALSGGSSLHRFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1369 182 SMART ring_2 95 136 IPR001841 -
Lele24g1369 182 SUPERFAMILY RING/U-box 76 143 - -
Lele24g1369 182 PANTHER - 27 177 - -
Lele24g1369 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 142 IPR013083 -
Lele24g1369 182 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Lele24g1369 182 Pfam Ring finger domain 94 137 IPR001841 -
Lele24g1369 182 CDD mRING-H2-C3H2C2D_ZSWM2 94 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1369 Lele-ChrLele24 19731162 19732356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1369 93 148 C3H Transcription Factor Family AT1G15100 53.571 8.07e-19 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1369 24 19731162 19732356 Lele24g1369 24 19731162 19732356 ECH
Lele21g1425 21 22715219 22718997 Lele24g1369 24 19731162 19732356 hybridization
Lele22g1416 22 19963968 19965165 Lele24g1369 24 19731162 19732356 hybridization