Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1332 ATGCACGCTCATGGAAACCAATTCAAAACCCCTGAAGCGTTAGCGAAGAAATTCTCTGATAAATCTGACGTCGCTAGTCACAAAACGGTGCGATTCTCTGCCCATTCGAAGGTTGCAATCGAAATAAATCGCCATTTGAAGCATTGTGGTCAGTCATCAAAGTGGAAATGCCCATGTGGGACCACATTTTCAAGGAAGGATAAATTGTTTGGCCATATAGCTCTGTTTGATGGGCATATGCCAGCTCTTGCTGAGGATGAAGAAGAGGAAGGGAAGCAAATGGTAAAGGAGCATGATGATGAAGATATGAATATGATGTTTAAGGAAGAAGATTCAGGACAAAATTATTTGAATGGGGATTTACCAGAAGGATTCTTTGACGATTTAGATGAATTTGGCAACTACTCTTTGGCTGAAGCTCTGGGCTTTCTCTAA 435 0.4138 MHAHGNQFKTPEALAKKFSDKSDVASHKTVRFSAHSKVAIEINRHLKHCGQSSKWKCPCGTTFSRKDKLFGHIALFDGHMPALAEDEEEEGKQMVKEHDDEDMNMMFKEEDSGQNYLNGDLPEGFFDDLDEFGNYSLAEALGFL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1332 144 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 43 114 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1332 Lele-ChrLele24 19381915 19382474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1332 20 87 C2H2 Transcription Factor Family AT1G34370 56.522 3.76e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele24g1332 None None None