LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele24g1321	ATGGAGCAATCAAGTACCATGTTGTATTATTTGTTTATTGTCTGCTTCCAGTTCCCACCACTTACCTCCTCCCACGTGTCCTTTTGGCGGTTCTTGTCATTCTGCGCCCTCGCGACTCCTGATTCCTTCCCCCAGCTGAGTCCTATTTCTCAAGGCACCTCTCCCTCACATTCTTCCCTGTTCTCTTGTTCTTTTCAACTCGATTCTCCTCTGAAACCAAAAGGAAATACAGCAGAAGATTGTTCAGAGAGAAACATAACAACAATGGAACGGTATGAGATAATCAAAGATATTGGGTCTGGGAATTTTGGTGTTGCCAAGCTCGTCAGAGAGAGACGCACCGGCGAGTTCTTCGCCGTCAAGTTCATTGAGAGAGGCTCCAAGATTGATGAGCATGTACAGAGAGAGATCACAAATCACAGATCCTTGAAACACCCTAACATCATTCGAGTTAAAGAGGTTTTGCTGACTCCAACTCATCTAGCTATAGTCATGGAATATGCTGCTGGTGGAGAACTTTTTGAAAGAATATGTAATGCGCGAAGATTCAGTGAAGACGAGGCAAGATACTTCTTTCAACAATTGATCTCTGGTGTGAGCTATTGCCATTCCATGGAAATCTGTCACAGAGACCTCAAGCTGGAAAACACATTGTTAGATGGAAGCCCAGCACCAAGACTTAAGATATGTGACTTTGGTTACTCAAAGTCTTCTGTTCTGCACTCTCAACCCAAATCTACAGTAGGAACACCTGCATATATTGCACCAGAAGTATTATCAAGAAAGGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACTTTATATGTGATGCTTGTTGGAGCTTATCCTTTTGAAGATCCGGAAGACCCAAGAAACTTCAGAAAAACACTTCAGAGAATCCTTAGCGTCCACTATTCTATTCCAGATTATGTTCGTGTTTCCCAAGAATGTAGACACCTTTTATCCAGAATATTTGTGGCCAACCCTGAAAAGAGAATTACAATTCCAGAAATAAAGAAGCATCCATGGTTTCTGTATAACTTGCCAATAGAATTCATGAACGAAGAAGAAGGGGAAAGTGGGATGGGGGAATTGGAAAGTGATGGGAATGAAAATGAAGGAAGTCAGAGCATAGAAGAAATACTGAGCATAATTCAAGAGGCTAGAAAACCAGGGGATGGTCCTAATAATAATAATAATAAACTTGGAGGAGGTCACTTTGTTGATGGAAGCATGGATCTTGATGATATTGACGCAGATGCTGACATTGATGATGTTGAAACTAGTGGTAATTTTGTCTGTGCCATGTGGTACTTCAGTTCATGTCCTTCTCTTCAATGA	1353	0.4161	MEQSSTMLYYLFIVCFQFPPLTSSHVSFWRFLSFCALATPDSFPQLSPISQGTSPSHSSLFSCSFQLDSPLKPKGNTAEDCSERNITTMERYEIIKDIGSGNFGVAKLVRERRTGEFFAVKFIERGSKIDEHVQREITNHRSLKHPNIIRVKEVLLTPTHLAIVMEYAAGGELFERICNARRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRVSQECRHLLSRIFVANPEKRITIPEIKKHPWFLYNLPIEFMNEEEGESGMGELESDGNENEGSQSIEEILSIIQEARKPGDGPNNNNNKLGGGHFVDGSMDLDDIDADADIDDVETSGNFVCAMWYFSSCPSLQ	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele24g1321	450	Pfam	Protein kinase domain	92	348	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele24g1321	450	ProSiteProfiles	Protein kinase domain profile.	92	348	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele24g1321	450	FunFam	Aurora kinase A	84	171	-	-
	Lele24g1321	450	SMART	serkin_6	92	348	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele24g1321	450	ProSitePatterns	Protein kinases ATP-binding region signature.	98	121	IPR017441	GO:0005524
	Lele24g1321	450	CDD	STKc_SnRK2	91	347	-	-
	Lele24g1321	450	PANTHER	SERINE/THREONINE KINASE	90	370	-	-
	Lele24g1321	450	Gene3D	Phosphorylase Kinase; domain 1	73	167	-	-
	Lele24g1321	450	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	207	219	IPR008271	GO:0004672\|GO:0006468
	Lele24g1321	450	SUPERFAMILY	Protein kinase-like (PK-like)	84	352	IPR011009	-
	Lele24g1321	450	FunFam	Serine/threonine-protein kinase SRK2E	168	356	-	-
	Lele24g1321	450	Gene3D	Transferase(Phosphotransferase) domain 1	168	353	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele24g1321	Lele-ChrLele24	19276698	19280053	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele24g1321	91	360	CBL-interacting serine-threonine protein kinases	AT4G24400	42.857	3.89e-68	221

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_OST1L	Lele24g1321		Pkinase	1.4e-72	CL0016