Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1315 ATGGCTTGTGGAAGAAAATGTAGTCCAATTCTTTCCCCTCTTCAATCGCCAGTGTCGCTTCCGCGGCCCACTTCGCTGTTTTTGTCTTCTGAAGTTGGTCATGGCATTGGTCAATTTCATGTTCTTCGTGTCGTGATGTTCGCCATAGCTTCCATATTTGGTATGCTTCTTATTCTTTTCGTCGTGCTGAAATTTTTGGGAAGGTACTGTTTGAGGAGATATTATAACAGGAGAAACAACTCACCGATATTGTTTGACATTCGTGGAGATTCTGCGTTCTCCGATGACGATGGACAGCCAATCATTCATCCGATCTGGTTCATCAACACCGTAGGTCTGCCGCAATCCGTTATAGATTCAATCGAAGTCTTCAAATACAGTAAAGACGATGGATTAGTGGAAGGAACAGAGTGTTCTGTATGTTTAGGTGAATTTCAAGAAGACGAGAGCCTCCGATTGTTACCTAAGTGCAGTCACGCTTTTCACGTTCAATGCATCGATACGTGGTTGAGATCGCGTAAGAATTGCCCCTTGTGTCGTGCTCCTATAGTTCGTGAAACTTCCGGAAGAGAGGTAAGCGTCGGGGTTGTGCCTGAACTCAACGTCGCCGCCGGCGAGATCCATGCAGAGAACTTGGATGGGAGTAGTGGTAGGCTTGTAGACAGTTCTCACGTTGGAGAAGGCGAGAGTAGTAGTCAATTGAGACTTGAAGAAGAAGATGATTCTGGGATTGTGCCTAATGAAGATGAAGCAGATGGTGAAGTTTCAGATAAAAATTTGGGAAATTCTGAGAAGATGATGAGGGTGAACAGGTCAGCTTCAGGACATTCTTATCCTTCTACCATTGAAGCATCAGCGCAGGAGCTGAATTCGTATTCTCTACACTCGTTTTAA 894 0.4474 MACGRKCSPILSPLQSPVSLPRPTSLFLSSEVGHGIGQFHVLRVVMFAIASIFGMLLILFVVLKFLGRYCLRRYYNRRNNSPILFDIRGDSAFSDDDGQPIIHPIWFINTVGLPQSVIDSIEVFKYSKDDGLVEGTECSVCLGEFQEDESLRLLPKCSHAFHVQCIDTWLRSRKNCPLCRAPIVRETSGREVSVGVVPELNVAAGEIHAENLDGSSGRLVDSSHVGEGESSSQLRLEEEDDSGIVPNEDEADGEVSDKNLGNSEKMMRVNRSASGHSYPSTIEASAQELNSYSLHSF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1315 297 FunFam RING-H2 finger protein ATL54 113 186 - -
Lele24g1315 297 CDD mRING-H2-C3H2C2D_ZSWM2 137 180 - -
Lele24g1315 297 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 44 187 IPR044675 -
Lele24g1315 297 MobiDBLite consensus disorder prediction 213 279 - -
Lele24g1315 297 SUPERFAMILY RING/U-box 117 189 - -
Lele24g1315 297 SMART FANCL_C_2 134 187 - -
Lele24g1315 297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 188 IPR013083 -
Lele24g1315 297 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Lele24g1315 297 SMART ring_2 138 179 IPR001841 -
Lele24g1315 297 Pfam Ring finger domain 137 180 IPR001841 -
Lele24g1315 297 MobiDBLite consensus disorder prediction 263 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1315 Lele-ChrLele24 19149070 19149963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1315 47 244 C3H Transcription Factor Family AT1G72220 41.791 2.61e-39 140