Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1314 ATGGGGGCTCGAGGACTGAGGAAGAAGAAAGAGTTTAATCATGGTTATATGTTTTGGCTCGCTCTGAAAGAAACTTGGTCTTTGAGTACGTTCGTTCCACTGAAAGAGGTGGGCTTAAGTTTCACTGAAGCAGAGAGGAGACTGAAGGAAAATGGACCAAATGTTCTGCATGAGCATACTTTTCCAAGCTGGGGGAATCTTCTATGGAGTGCACTTTTTCATCCTTTCAATATCATTCTGATTGTCTTGTCAAGCTTGTCCTTCATAACCAGTGATATTCCAAATGGTTATATCATGCTCACACTTGTTTTTATCAGTGTCTCCCTTCGTTGCTGCCAGCAGTTCAAAAGCAGTCATGAAGCTTTCGGAATTTCTAAGATACCCAACAAAAGTTCAATGCAACAAGAATTAGTAGTTCAGATTGATCAGGGGGATATAGTTCCTGGTGACATCGTGATTTTTGAACCTGGGGATCTCTTTCCTGGAGACGTCAGATTGTTATCTTCCAAAAATCTTGTTGGCACAAACGTGGTATCTGGGAGTGGGACAGGCCTAGTTATATCAACTGGATCTGATACATACATGAACACCATGTTCTCAAAGATTGGGAAGAAGAAGCCACCAGATGAATTTGAATATGGCCTACGCTGGATTTTTTATGTGCACACTGGCTATTATTATGCTAGTGGTACACTGACAATGAACCGTGCCATTATGGTAAATCATCTTGAATTCCATGGGATAACGCAAGAGAAAGTTCTACGCTTTGCGTTCCTCAATTCTTACTTCAAGACAGATCAGAAGTATCCTCTGGATGATGCCATATTGGCTTTTGTATATTCAAATGGATTCAGATTTCAGCCCTCAAAATGGACGAAAATAGATGAGATTCCTTTTGATTTCATACGTAGGAGAGTATCTGTCATCATAGAAACAGAGTCGCATATTGAAGATGGACAGTCTCAGGTATTTGGCAGGTTCATGGTAACTAAAGGGGCATTGGAGGAAGTAATAAGAGTTTGTTCTTTCATTGAGAATTTCAATAACCATGAAGTTTCCAAGTTCTCAGCAGATGATTATAACAGAATTTTAGCCTTGGCAGAAGGATTGAGCAATGAGGGATTAAGAATTATAGAAGTAGCTATAAAGAAGCTAGAAATGGACTCAGCAGGGCAAGCATTGTGGCGCTTAGCAGAGAAAGGAGTCAAAGCAACAGTTTTGACAGATGACTTACTTTCCTTAGTCATGAGGGCTCACTCCAATTCAGAAACTGCGTGTAGTCCAGTCATTACAGATAATGGGAACCACGTTGTCGGGTTCTTGGGAGACGGTATTAACGATTCACTCGCCCTTGATGCTGCCAATGTCAGCATTTCAGTGGACTCAGGCGTAGCAATTGCCAAAGACATGGCAGACATCATACTGCTTGAGAAAGATCTTAATGCTCTTGTGGCAGGAGTAGAACATGGTAGACTCACAGTTGGAAACACAATGAAGTACATTAAAACATCGGTTATCGCTAACTTAGGAAGCGTGCTTTCGCTGCTCATAGCGACCTTGACTCTGATTATCCACTTGATTAGAACTGAGAAAATTCCATTTATACAGGACATAGCTTCATGGCCTGTGATTTGTTCCACTGTTGTCATTTCTTGTATTGGAATCGCCCTTCCATTCACGCCCACTGGAGAAGTCATGGGACTCGCGAGTTTACCTCTCTCGTATTTTGGGTTTTTGGTTGTTCTTTTCCTGGTTTACTTTACAATTGGCCAAGTGGTCAAGAGGCTTTACATATTGGTTTATAGAAGATGGCTTTGA 1818 0.4131 MGARGLRKKKEFNHGYMFWLALKETWSLSTFVPLKEVGLSFTEAERRLKENGPNVLHEHTFPSWGNLLWSALFHPFNIILIVLSSLSFITSDIPNGYIMLTLVFISVSLRCCQQFKSSHEAFGISKIPNKSSMQQELVVQIDQGDIVPGDIVIFEPGDLFPGDVRLLSSKNLVGTNVVSGSGTGLVISTGSDTYMNTMFSKIGKKKPPDEFEYGLRWIFYVHTGYYYASGTLTMNRAIMVNHLEFHGITQEKVLRFAFLNSYFKTDQKYPLDDAILAFVYSNGFRFQPSKWTKIDEIPFDFIRRRVSVIIETESHIEDGQSQVFGRFMVTKGALEEVIRVCSFIENFNNHEVSKFSADDYNRILALAEGLSNEGLRIIEVAIKKLEMDSAGQALWRLAEKGVKATVLTDDLLSLVMRAHSNSETACSPVITDNGNHVVGFLGDGINDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNALVAGVEHGRLTVGNTMKYIKTSVIANLGSVLSLLIATLTLIIHLIRTEKIPFIQDIASWPVICSTVVISCIGIALPFTPTGEVMGLASLPLSYFGFLVVLFLVYFTIGQVVKRLYILVYRRWL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1314 605 Gene3D - 479 523 - -
Lele24g1314 605 SMART Cation_ATPase_N_a_2 24 92 IPR004014 -
Lele24g1314 605 Gene3D - 70 117 - -
Lele24g1314 605 Gene3D - 38 170 - -
Lele24g1314 605 Gene3D - 237 408 IPR023299 GO:0000166
Lele24g1314 605 Gene3D - 434 478 IPR023214 -
Lele24g1314 605 SUPERFAMILY Calcium ATPase, transduction domain A 136 200 IPR008250 -
Lele24g1314 605 SUPERFAMILY HAD-like 347 491 IPR036412 -
Lele24g1314 605 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 231 389 IPR023299 GO:0000166
Lele24g1314 605 PANTHER CATION TRANSPORTING ATPASE 38 204 - -
Lele24g1314 605 SUPERFAMILY Calcium ATPase, transmembrane domain M 36 602 IPR023298 -
Lele24g1314 605 Pfam Cation transporter/ATPase, N-terminus 37 87 IPR004014 -
Lele24g1314 605 PRINTS P-type cation-transporting ATPase superfamily signature 225 239 - -
Lele24g1314 605 PRINTS P-type cation-transporting ATPase superfamily signature 464 476 - -
Lele24g1314 605 PRINTS P-type cation-transporting ATPase superfamily signature 441 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1314 Lele-ChrLele24 19143791 19147726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1314 435 520 Primary Pumps ATPases(2) AT1G10130 36.047 5.56e-13 70.5