Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1310 ATGGGTCTCTCAAATATCCCTAATTTATCTGAAGGGGTACTTCCTGCACTTGTGGTTAACACAGTTCTATCAGTGGTTCTTCTCAAGAACATGCTGAGATCTGTGCTGGAAGCCGTTGGCGTGACATCCTCGTCGTCATCAACATCGTCACCGTATTCTCAGAATATGGAGGAAGATTCAGATGAAGAAACAGAGCGAGAGAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGGTTTGTAGCGGAACAGCACCATCAACAACAACAAGAAGTGACTCTGGTTCGAGTGTTGGAGGACTATCGGGTAAGGTGGAGTGCTGCGTATGTTTGTGTGGGTTCGAAGCGAATCAGGAGGTGAGTGAATTGCCCTGCAAGCATTTCTTCCACAGAGCTTGCTTGGACAAGTGGTTCGATAACAAACACTTAACTTGTCCTCTATGTCGTTCCATAGATTGA 462 0.4589 MGLSNIPNLSEGVLPALVVNTVLSVVLLKNMLRSVLEAVGVTSSSSSTSSPYSQNMEEDSDEETERESWRRRRVSITQYKVCSGTAPSTTTRSDSGSSVGGLSGKVECCVCLCGFEANQEVSELPCKHFFHRACLDKWFDNKHLTCPLCRSID 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1310 153 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Lele24g1310 153 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 152 IPR013083 -
Lele24g1310 153 Pfam Ring finger domain 107 150 IPR001841 -
Lele24g1310 153 SMART ring_2 108 149 IPR001841 -
Lele24g1310 153 MobiDBLite consensus disorder prediction 43 70 - -
Lele24g1310 153 SMART ringv_2 107 150 IPR011016 GO:0008270
Lele24g1310 153 PANTHER - 1 151 IPR044249 -
Lele24g1310 153 SUPERFAMILY RING/U-box 107 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1310 Lele-ChrLele24 19117488 19117949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1310 1 151 C3H Transcription Factor Family AT2G04240 33.951 1.01e-20 81.3