Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1307 ATGTCTAAACCATGGGGTGGTGCCGGAGCTTGGGCCGCCGAGGCCGAGCGCGCTGAGGCTGAAGAGCGGGAGCAAGCGGCAGCTGCCGCCGCTTCGGGATCCCAGAACTTCCCCAGCTTGAGGGAGGCTGTGAATACGAAGCCCAAGAAGAAGAAAATGTCTGTGGCGGAGTTTAATAGGATTTCCACTGCCGGCGGAGGTGGCATCGCCACCGAGTATAAGGGTCTGACGCCAGATGAGATGCTTCGGCTCCCTACGGGCCCGAAGGATCGATCTGCGGATGAAATGCCGTATAGTCGTGGGTTATACTCTTACGGGCGTTCTGGTCCGCTGCAAGGACGCATGAGAGACCGTGACGACAATGATGGCTCTTGGGGTGGAGGAAGAAGATCCTATGGAGGATTTGATGAAGAACGTAGGGGTCCCTCTTCTAGGGTTTCAGATTATGATCAGCCATCCAGGGCAGACGAGAGTATTAATTGGAACGCAGTTAAAAAATCTCTTCCATCGTTCGATTCAGGTCGGCAAAATCGCTATGGTTCGCTTGGTTGTGGTTCCAGGGCCGATGAGAAGGATAACTGGTTAGTTGGTAAAAAGCCTTTTCCCGCTAGATCTCCCGCATTTGTTTCTGTGTTTCGCGATTCGGGTGTGGAGCCTGACCGATGGACAAGAGGAACACCGCGCGATAACGAGCGGGAGCGTCCCAGATTGGTATTGGATCCGCCAAAAGGTAATGCCCCTGTTAATGAACCGGTCAAGACAAATAAGGCGAGTCCATTTGGCGCAGCTAGGCCCAGGGAAGAAGTTTTGGCTGAGAAGGGTGTGGATTGGAAGAAGGTGGACTCTGAAATTGAAGCTAAGAAGACCAGTAGGCCTTCAAGTTCGCACTCTATCAGGCCATCCAGTGCTCAATCCAGTCGTTCTGAGGATACAGGGTCGCAGGAGACAGAAACCATTGTAAAGCCCAGACCAAAGGTGAATCCATTTGGGGATGCAAAACCCCGAGAAGTATTGCTGGAGGAGCGAGGTAAAGATTGGCGGAAGATTGATCTAGAATTGGAACATCGCGGTGTTGACAGGCCAGAAACTATGGAGGAAAAGTTATTGAAAGAAGAAATTGATAATTTGAAGGAGCTTGAGAAAGATTTAACATTAAATTCAAGGAAGGAATCTGTGGAAGAGGATGGAGAAGACCAAAGTAGCCTACAAGAAACTTTACTTCAGAAGGAAAGGGAGTTGGAGACTCTTATTCGTGATTTGGATGACAAAGTTCGTTTTGGGCAAAAAGCTATTGAAAGGCCTGGCTCTGGAGTAGGAAGGCCTGGTTCTGGAGCAGGAAGGCCAGGTTCTGGAGCGGGAAGGGCTGCTGGTTTTCCTGATAGGCCACATTCTCAGTCTGGCTCATTTGAGGATTCTAGGAGTGTGGACTTCACAGACAGACCTCCATCCCGAGGCACAGGAGATGTGTGGACACGGCCTGATGACAGAAGACCATTTCAAGGTGCCAGGGACAGAGGGTTTCCAAATAGCAGGGTCTTGGATAGGTCAAGATCGAGAGAGAGATGGTGA 1569 0.508 MSKPWGGAGAWAAEAERAEAEEREQAAAAAASGSQNFPSLREAVNTKPKKKKMSVAEFNRISTAGGGGIATEYKGLTPDEMLRLPTGPKDRSADEMPYSRGLYSYGRSGPLQGRMRDRDDNDGSWGGGRRSYGGFDEERRGPSSRVSDYDQPSRADESINWNAVKKSLPSFDSGRQNRYGSLGCGSRADEKDNWLVGKKPFPARSPAFVSVFRDSGVEPDRWTRGTPRDNERERPRLVLDPPKGNAPVNEPVKTNKASPFGAARPREEVLAEKGVDWKKVDSEIEAKKTSRPSSSHSIRPSSAQSSRSEDTGSQETETIVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLELEHRGVDRPETMEEKLLKEEIDNLKELEKDLTLNSRKESVEEDGEDQSSLQETLLQKERELETLIRDLDDKVRFGQKAIERPGSGVGRPGSGAGRPGSGAGRAAGFPDRPHSQSGSFEDSRSVDFTDRPPSRGTGDVWTRPDDRRPFQGARDRGFPNSRVLDRSRSRERW 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1307 522 MobiDBLite consensus disorder prediction 146 180 - -
Lele24g1307 522 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 521 IPR010433 GO:0003743
Lele24g1307 522 MobiDBLite consensus disorder prediction 424 522 - -
Lele24g1307 522 Pfam Plant specific eukaryotic initiation factor 4B 1 443 IPR010433 GO:0003743
Lele24g1307 522 Pfam Plant specific eukaryotic initiation factor 4B 446 506 IPR010433 GO:0003743
Lele24g1307 522 MobiDBLite consensus disorder prediction 489 522 - -
Lele24g1307 522 MobiDBLite consensus disorder prediction 217 239 - -
Lele24g1307 522 MobiDBLite consensus disorder prediction 293 320 - -
Lele24g1307 522 MobiDBLite consensus disorder prediction 380 406 - -
Lele24g1307 522 MobiDBLite consensus disorder prediction 266 292 - -
Lele24g1307 522 MobiDBLite consensus disorder prediction 1 336 - -
Lele24g1307 522 Coils Coil 362 389 - -
Lele24g1307 522 MobiDBLite consensus disorder prediction 380 396 - -
Lele24g1307 522 Coils Coil 399 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1307 Lele-ChrLele24 19079886 19085120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1307 1 522 Eukaryotic Initiation Factors Gene Family AT3G26400 49.298 4.67e-131 390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1307 24 19079886 19085120 Lele24g1307 24 19079886 19085120 ECH
Lele21g1354 21 21999321 22005540 Lele24g1307 24 19079886 19085120 hybridization
Lele22g1348 22 19281581 19286784 Lele24g1307 24 19079886 19085120 hybridization